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Slc5a4a
Gene Detail
Symbol

Name
ID
Slc5a4a
solute carrier family 5, member 4a
MGI:1927848
Feature Type
protein coding gene
Genetic Map
Chromosome 10
38.71 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr10:76147451-76189265 bp, + strand
From NCBI annotation of GRCm38

  41815 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HCOP human homology predictions: SLC5A4
Gene Tree: Slc5a4a
Human
homologs
SLC5A4, solute carrier family 5 (glucose activated ion channel), member 4
Orthology source: HGNC

IDs:
NCBI Gene ID: 6527
neXtProt AC: NX_Q9NY91

Human Synonyms: DJ90G24.4, SAAT1, SGLT3

Human Chr (Location): 22q12.3; chr22:32218421-32353008 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (2 records)
Data Summary: Results (1)    Tissues (1)    Images (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 1
cDNA source data(2)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(6) Genomic(2) cDNA(2) Primer pair(1) Other(1)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000020229 (Evidence)
Entrez Gene 64452 (Evidence)
UniGene 154797
DFCI TC1595858
DoTS DT.91372901
Consensus CDS Project CCDS35941.1
International Mouse Phenotyping Consortium Status Slc5a4a
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 64452 NCBI Gene Model | MGI Sequence Detail 41815 C57BL/6J ±  kb
transcript NM_133184 RefSeq | MGI Sequence Detail 2055 C57BL/6 
polypeptide Q9ET37 UniProt | EBI | MGI Sequence Detail 656 Not Applicable 

For the selected sequences
All sequences(16) RefSeq(2) UniProt(3)
Polymorphisms
SNPs within 2kb(162 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001734 Sodium/solute symporter
InterPro IPR018212 Sodium/solute symporter, conserved site
InterPro IPR019900 Sodium/solute symporter, subgroup
Protein Ontology PR:000033752 low affinity sodium-glucose cotransporter
Graphical View of Protein Domain Structure
References
(Earliest) J:65171 Pletcher MT, et al., Chromosome evolution: the junction of mammalian chromosomes in the formation of mouse chromosome 10. Genome Res. 2000 Oct;10(10):1463-7
(Latest) J:201615 Zukerman S, et al., Post-oral appetite stimulation by sugars and nonmetabolizable sugar analogs. Am J Physiol Regul Integr Comp Physiol. 2013 Oct;305(7):R840-53
All references(22)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
06/30/2015
MGI 5.22
The Jackson Laboratory