About   Help   FAQ
Scoc Gene Detail
Summary
  • Symbol
    Scoc
  • Name
    short coiled-coil protein
  • Synonyms
    0610011C06Rik, 2810002J11Rik, short coiled-coil protein
  • Feature Type
    protein coding gene
  • IDs
    MGI:1927654
    NCBI Gene: 56367
Location & Maps
more
  • Sequence Map
    Chr8:83430084-83458391 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      28308 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 40.22 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SCOC, short coiled-coil protein
  • Vertebrate Orthologs
    8
  • Human Ortholog
    SCOC, short coiled-coil protein
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HRIHFB2072, SCOCO, UNC-69
  • Links
    NCBI Gene ID: 60592
    neXtProt AC: NX_Q9UIL1

  • Chr Location
    4q31.1; chr4:140257286-140382556 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    33 phenotype references
  • All Mutations and Alleles
    10
  • Chemically induced (other)
    1
  • Gene trapped
    7
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    2 involving Scoc
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000061552 VEGA Gene Model | MGI Sequence Detail 28308 C57BL/6J ±  kb
transcript OTTMUST00000150153 VEGA | MGI Sequence Detail 1791 Not Applicable  
polypeptide OTTMUSP00000077847 VEGA | MGI Sequence Detail 125 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    498 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 100
    cDNA 100

    Microarray probesets 6
Other
Accession IDs
less
MGI:1914876, MGI:1923509, MGI:2142423
References
more
  • Summaries
    All 31
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 33
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/22/2016
MGI 6.06
The Jackson Laboratory