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Rsph6a Gene Detail
Summary
  • Symbol
    Rsph6a
  • Name
    radial spoke head 6 homolog A (Chlamydomonas)
  • Synonyms
    Rshl1, RSP4
  • Feature Type
    protein coding gene
  • IDs
    MGI:1927643
    NCBI Gene: 83434
  • Gene Overview
    MyGene.info: RSPH6A
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:19054690-19074447 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 9.46 cM, cytoband A2
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    134 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1927643
protein coding gene Chr7:19054678-19074447 (.)
129S1/SvImJ MGP_129S1SvImJ_G0031755
protein coding gene Chr7:17001661-17025321 (+)
A/J MGP_AJ_G0031731
protein coding gene Chr7:16695243-16714707 (+)
AKR/J MGP_AKRJ_G0031657
protein coding gene Chr7:17153150-17173690 (+)
BALB/cJ MGP_BALBcJ_G0031736
protein coding gene Chr7:16888031-16907416 (+)
C3H/HeJ MGP_C3HHeJ_G0031458
protein coding gene Chr7:17406033-17432689 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032202
protein coding gene Chr7:17893066-17917913 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029268
protein coding gene Chr7:18340155-18362974 (+)
CAST/EiJ MGP_CASTEiJ_G0030801
protein coding gene Chr7:13811566-13833591 (+)
CBA/J MGP_CBAJ_G0031420
protein coding gene Chr7:18537227-18561207 (+)
DBA/2J MGP_DBA2J_G0031575
protein coding gene Chr7:16630349-16650067 (+)
FVB/NJ MGP_FVBNJ_G0031527
protein coding gene Chr7:16492108-16513882 (+)
LP/J MGP_LPJ_G0031658
protein coding gene Chr7:17345291-17370697 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031563
protein coding gene Chr7:18402745-18429549 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032230
protein coding gene Chr7:16754652-16779162 (+)
PWK/PhJ MGP_PWKPhJ_G0030525
protein coding gene Chr7:13713717-13738423 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030352
protein coding gene Chr7:11439503-11463806 (+)
WSB/EiJ MGP_WSBEiJ_G0030901
protein coding gene Chr7:16959599-16979968 (+)



Homology
more
  • Human Ortholog
    RSPH6A, radial spoke head 6 homolog A
  • Vertebrate Orthologs
    7
  • Human Ortholog
    RSPH6A, radial spoke head 6 homolog A
    Orthology source: HomoloGene, HGNC
  • Synonyms
    RSHL1, RSP4, RSP6, RSPH4B
  • Links
    NCBI Gene ID: 81492
    neXtProt AC: NX_Q9H0K4
    UniProt: Q9H0K4

  • Chr Location
    19q13.32; chr19:45795710-45815347 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000040866 Ensembl Gene Model | MGI Sequence Detail 19758 C57BL/6J ±  kb
transcript ENSMUST00000035521 Ensembl | MGI Sequence Detail 2354 Not Applicable  
polypeptide ENSMUSP00000046526 Ensembl | MGI Sequence Detail 708 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 2
References
more
  • Summaries
    All 17
    Gene Ontology 2
  • Earliest
    J:67997 Eriksson M, et al., A Mammalian Radial Spokehead-Like Gene, RSHL1, at the Myotonic Dystrophy-1 Locus. Biochem Biophys Res Commun. 2001 Mar 9;281(4):835-41

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory