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Gprc5b Gene Detail
Summary
  • Symbol
    Gprc5b
  • Name
    G protein-coupled receptor, family C, group 5, member B
  • Synonyms
    hypothetical protein, clone 2-63
  • Feature Type
    protein coding gene
  • IDs
    MGI:1927596
    NCBI Gene: 64297
  • Gene Overview
    MyGene.info: GPRC5B
  • Alliance
    gene page
  • Transcription Start Sites
    13 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:118972047-118995211 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 63.72 cM, cytoband F3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    223 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1927596
 protein coding gene Chr7:118972040-118995211 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032907
 protein coding gene Chr7:122859662-122882850 (-)
A/J MGP_AJ_G0032890
 protein coding gene Chr7:119718893-119742076 (-)
AKR/J MGP_AKRJ_G0032822
 protein coding gene Chr7:122782233-122805402 (-)
BALB/cJ MGP_BALBcJ_G0032895
 protein coding gene Chr7:119445302-119468531 (-)
C3H/HeJ MGP_C3HHeJ_G0032605
 protein coding gene Chr7:122680891-122704081 (-)
C57BL/6NJ MGP_C57BL6NJ_G0033401
 protein coding gene Chr7:127750576-127773737 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0030373
 protein coding gene Chr7:121151515-121174635 (-)
CAST/EiJ MGP_CASTEiJ_G0031933
 protein coding gene Chr7:114445510-114480151 (-)
CBA/J MGP_CBAJ_G0032578
 protein coding gene Chr7:132021068-132044256 (-)
DBA/2J MGP_DBA2J_G0032730
 protein coding gene Chr7:117753771-117776945 (-)
FVB/NJ MGP_FVBNJ_G0032683
 protein coding gene Chr7:117597211-117621259 (-)
LP/J MGP_LPJ_G0032824
 protein coding gene Chr7:124322612-124345790 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0032715
 protein coding gene Chr7:133494455-133517609 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0033421
 protein coding gene Chr7:121785423-121808602 (-)
PWK/PhJ MGP_PWKPhJ_G0031641
 protein coding gene Chr7:110653040-110686359 (-)
SPRET/EiJ MGP_SPRETEiJ_G0031488
 protein coding gene Chr7:108505099-108533973 (-)
WSB/EiJ MGP_WSBEiJ_G0032046
 protein coding gene Chr7:122668581-122691705 (-)



Homology
more
  • Human Ortholog
    GPRC5B, G protein-coupled receptor class C group 5 member B
  • Vertebrate Orthologs
    10
  • Human Ortholog
    GPRC5B, G protein-coupled receptor class C group 5 member B
    Orthology source: HGNC, HomoloGene
  • Synonyms
    RAIG2, RAIG-2
  • Links
    NCBI Gene ID: 51704
    neXtProt AC: NX_Q9NZH0
    UniProt: Q9NZH0

  • Chr Location
    16p12.3; chr16:19858971-19886045 (-)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotypes from 3 alleles in 3 genetic backgrounds
    12 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for a reporter allele exhibit partial neonatal and postnatal lethality, altered spontaneous activity pattern, and decreased response to a new environment.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    54
  • GO References
    10
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    60
  • Tissues
    44
  • cDNA Data
    6
  • Literature Summary
    8
  • Comparison Matrix
    Gene Expression + Phenotype
    • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000008734 Ensembl Gene Model | MGI Sequence Detail 23165 C57BL/6J ±  kb
    transcript ENSMUST00000208394 Ensembl | MGI Sequence Detail 1416 Not Applicable  
    polypeptide ENSMUSP00000146777 Ensembl | MGI Sequence Detail 411 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 8
      cDNA 6
      Primer pair 1
      Other 1

      Microarray probesets 6
    Other
    Accession IDs
    less
    MGI:2142210
    References
    more
    • Summaries
      All 46
      Developmental Gene Expression 8
      Gene Ontology 10
      Phenotypes 12
    • Earliest
      J:64911 Inoue S, et al., Growth suppression of Escherichia coli by induction of expression of mammalian genes with transmembrane or ATPase domains. Biochem Biophys Res Commun. 2000 Feb 16;268(2):553-61
    • Latest
      J:259479 Sano T, et al., Loss of GPRC5B impairs synapse formation of Purkinje cells with cerebellar nuclear neurons and disrupts cerebellar synaptic plasticity and motor learning. Neurosci Res. 2018 Feb 23;
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/04/2018
    MGI 6.13     		The Jackson Laboratory