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Rab13 Gene Detail
Summary
  • Symbol
    Rab13
  • Name
    RAB13, member RAS oncogene family
  • Synonyms
    0610007N03Rik, B230212B15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1927232
    NCBI Gene: 68328
  • Gene Overview
    MyGene.info: RAB13
Location & Maps
more
  • Sequence Map
    Chr3:90213695-90226385 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      12691 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 39.21 cM, cytoband F2
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    RAB13, RAB13, member RAS oncogene family
  • Vertebrate Orthologs
    9
  • Human Ortholog
    RAB13, RAB13, member RAS oncogene family
    Orthology source: HomoloGene, HGNC
  • Synonyms
    GIG4
  • Links
    NCBI Gene ID: 5872
    neXtProt AC: NX_P51153

  • Chr Location
    1q21.2; chr1:153981617-153986377 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    37
  • Chemically induced (other)
    1
  • Gene trapped
    32
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    2 involving Rab13
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000021948 VEGA Gene Model | MGI Sequence Detail 12691 C57BL/6J ±  kb
transcript OTTMUST00000052099 VEGA | MGI Sequence Detail 1107 Not Applicable  
polypeptide OTTMUSP00000024637 VEGA | MGI Sequence Detail 202 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    61 from dbSNP Build 142
Protein
Information
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  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000013585 ras-related protein Rab-13
  • InterPro Domains
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
    IPR001806 Small GTPase superfamily
    IPR005225 Small GTP-binding protein domain
Molecular
Reagents
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  • All nucleic 25
    cDNA 24
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
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MGI:1915578, MGI:1924746
References
more
  • Summaries
    All 33
    Developmental Gene Expression 2
    Gene Ontology 9
    Phenotypes 8
  • Earliest
    J:65401 Sheth B, et al., Differentiation of the epithelial apical junctional complex during mouse preimplantation development: a role for rab13 in the early maturation of the tight junction. Mech Dev. 2000 Oct;97(1-2):93-104
  • Latest
    J:211898 Sato T, et al., Rab8a and Rab8b are essential for several apical transport pathways but insufficient for ciliogenesis. J Cell Sci. 2014 Jan 15;127(Pt 2):422-31

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/13/2016
MGI 6.05
The Jackson Laboratory