B4galt5
Gene Detail

Symbol Name ID

B4galt5 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 MGI:1927169

Synonyms

9430078I07Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 2

87.22 cM, cytoband H3
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr2:167298444-167349183 bp, - strand From VEGA annotation of GRCm38   50740 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Mammalian homology

human; cattle; chimpanzee; dog, domestic    (Mammalian Orthology)
Comparative Map (Mouse/Human B4galt5 ± 2 cM)

Protein SuperFamily: beta-1,4-galactosyltransferase, B4GalT1-6 types
Gene Tree: B4galt5

Human ortholog

B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 NCBI Gene ID 9334
Human Synonyms: B4Gal-T5, beta4Gal-T5, BETA4-GALT-IV, beta4GalT-V, gt-V
Human Chr20:48249482-48330421 bp, - strand Reference GRCh37.p2 Primary Assembly

Alleles and phenotypes

All alleles(10) : Targeted(2) Gene trapped(8)
 

Homozygous mutation of this gene results in lethality before weaning. Heterozygous mutant mice exhibit increased anxiety-like response.

 

Gene Ontology (GO) classifications

All GO classifications: (8 annotations)

Process	carbohydrate metabolic process
Component	Golgi apparatus, integral to membrane, ...
Function	metal ion binding, transferase activity, ...

External Resources: FuncBase

Expression

Literature Summary: (3 records)
Data Summary: Results (185)    Tissues (129)    Images (24)
Theiler Stages: 19, 22, 23, 25, 28

Assay Type	Results
RNA in situ	167
Northern blot	18

cDNA source data(11)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(13) cDNA(11) Primer pair(1) Other(1)
Microarray probesets(5)

Other database links

VEGA Gene Model	OTTMUSG00000001180 (Evidence)
Ensembl Gene Model	ENSMUSG00000017929 (Evidence)
Entrez Gene	56336 (Evidence)
DFCI	TC1583312, TC1601977, TC1603105, TC1651816, TC1719857
DoTS	DT.530684
NIA Mouse Gene Index	U023678
EC	2.4.1.-
Consensus CDS Project	CCDS17098.1
International Mouse Knockout Project Status	B4galt5

Sequences

Length	Strain/Species
genomic	OTTMUSG00000001180	VEGA Gene Model | MGI Sequence Detail	50740	C57BL/6J
transcript	OTTMUST00000002313	VEGA | MGI Sequence Detail	4210	Not Applicable
polypeptide	OTTMUSP00000001139	VEGA | MGI Sequence Detail	388	Not Applicable

All sequences(48) RefSeq(2) UniProt(4)

Polymorphisms

SNPs(189 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR003859	Galactosyltransferase, metazoa
Protein Ontology	PR:000004609	beta-1,4-galactosyltransferase 5

References

(Earliest) J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(42)

Other accession IDs

MGI:1924610, MGI:2139281, MGI:2139367