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B4galt5
Gene Detail
Symbol

Name
ID
B4galt5
UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5
MGI:1927169
Synonyms
9430078I07Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 2
87.22 cM, cytoband H3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr2:167298444-167349183 bp, - strand
From VEGA annotation of GRCm38

  50740 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:3507  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: B4GALT5
Protein SuperFamily: beta-1,4-galactosyltransferase, B4GalT1-6 types
Gene Tree: B4galt5

Human
homologs
B4GALT5, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 9334
neXtProt AC: NX_O43286

Human Synonyms: B4Gal-T5, beta4Gal-T5, BETA4-GALT-IV, beta4GalT-V, gt-V

Human Chr (Location): 20q13.1-q13.2; chr20:49632945-49713884 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(10) : Gene trapped(8) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
 
Homozygous mutation of this gene results in lethality before weaning. Heterozygous mutant mice exhibit increased anxiety-like response.
 
Interactions
B4galt5 interacts with 288 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (3 records)
Data Summary: Results (185)    Tissues (130)    Images (24)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 167
Northern blot 18
cDNA source data(11)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase b4galt5    NEW 
Molecular
reagents
All nucleic(13) cDNA(11) Primer pair(1) Other(1)
Microarray probesets(5)
Other database
links
VEGA Gene Model OTTMUSG00000001180 (Evidence)
Ensembl Gene Model ENSMUSG00000017929 (Evidence)
Entrez Gene 56336 (Evidence)
DFCI TC1651816, TC1603105, TC1719857, TC1583312, TC1601977
DoTS DT.530684
NIA Mouse Gene Index U023678
EC 2.4.1.-
Consensus CDS Project CCDS17098.1
International Mouse Phenotyping Consortium Status B4galt5
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000001180 VEGA Gene Model | MGI Sequence Detail 50740 C57BL/6J ±  kb
transcript OTTMUST00000002313 VEGA | MGI Sequence Detail 4210 Not Applicable 
polypeptide OTTMUSP00000001139 VEGA | MGI Sequence Detail 388 Not Applicable 

For the selected sequences
All sequences(49) RefSeq(2) UniProt(4)
Polymorphisms
SNPs within 2kb(209 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR003859 Galactosyltransferase, metazoa
Protein Ontology PR:000004609 beta-1,4-galactosyltransferase 5
References
(Earliest) J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(42)
Other
accession IDs
MGI:1924610, MGI:2139281, MGI:2139367

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory