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Ccnl2 Gene Detail
Summary
  • Symbol
    Ccnl2
  • Name
    cyclin L2
  • Synonyms
    1700010A01Rik, 1810019L15Rik, 2010319M22Rik, ania-6b, MGC:21593, Pcee
  • Feature Type
    protein coding gene
  • IDs
    MGI:1927119
    NCBI Gene: 56036
  • Gene Overview
    MyGene.info: CCNL2
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:155812489-155824543 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 87.47 cM
  • Mapping Data
    5 experiments
Strain
Comparison
more
  • SNPs within 2kb
    141 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1927119
protein coding gene Chr4:155811975-155824543 (.)
129S1/SvImJ MGP_129S1SvImJ_G0029230
protein coding gene Chr4:160176764-160189126 (+)
A/J MGP_AJ_G0029195
protein coding gene Chr4:153431062-153443020 (+)
AKR/J MGP_AKRJ_G0029143
protein coding gene Chr4:157599816-157612196 (+)
BALB/cJ MGP_BALBcJ_G0029211
protein coding gene Chr4:153903980-153916010 (+)
C3H/HeJ MGP_C3HHeJ_G0028932
protein coding gene Chr4:158148683-158161473 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029660
protein coding gene Chr4:165858374-165870422 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026905
protein coding gene Chr4:145719128-145731460 (+)
CAST/EiJ MGP_CASTEiJ_G0028344
protein coding gene Chr4:155613019-155636886 (+)
CBA/J MGP_CBAJ_G0028894
protein coding gene Chr4:170873316-170885346 (+)
DBA/2J MGP_DBA2J_G0029043
protein coding gene Chr4:153451592-153463580 (+)
FVB/NJ MGP_FVBNJ_G0029006
protein coding gene Chr4:152700742-152712751 (+)
LP/J MGP_LPJ_G0029133
protein coding gene Chr4:160108005-160120019 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029033
protein coding gene Chr4:173681941-173693962 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029692
protein coding gene Chr4:158232965-158244965 (+)
PWK/PhJ MGP_PWKPhJ_G0028065
protein coding gene Chr4:149594392-149606597 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027899
protein coding gene Chr4:152492191-152506124 (+)
WSB/EiJ MGP_WSBEiJ_G0028424
protein coding gene Chr4:158405521-158419278 (+)



Homology
more
  • Human Ortholog
    CCNL2, cyclin L2
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CCNL2, cyclin L2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ANIA-6B, CCNM, CCNS, HCLA-ISO, HLA-ISO, PCEE, SB138
  • Links
    NCBI Gene ID: 81669
    neXtProt AC: NX_Q96S94
    UniProt: Q96S94

  • Chr Location
    1p36.33; chr1:1385711-1399338 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000029068 Ensembl Gene Model | MGI Sequence Detail 12055 C57BL/6J ±  kb
transcript ENSMUST00000030944 Ensembl | MGI Sequence Detail 2442 Not Applicable  
polypeptide ENSMUSP00000030944 Ensembl | MGI Sequence Detail 518 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 23
    cDNA 21
    Primer pair 1
    Other 1

    Microarray probesets 6
Other
Accession IDs
less
MGI:1913517, MGI:1922723, MGI:1923779, MGI:2140567, MGI:2140748
References
more
  • Summaries
    All 39
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 7
  • Earliest
    J:30420 Cheng H, et al., Patterns of gene expression along the crypt-villus axis in mouse jejunal epithelium. Anat Rec. 1996 Jan;244(1):78-94
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory