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Ccnl2
Gene Detail
Symbol

Name
ID
Ccnl2
cyclin L2
MGI:1927119
Synonyms
1700010A01Rik, 1810019L15Rik, 2010319M22Rik, ania-6b, MGC:21593, Pcee
Feature Type
protein coding gene
Genetic Map
Chromosome 4
87.47 cM
Detailed Genetic Map ± 1 cM


Mapping data(5)
Sequence Map
Chr4:155812489-155824543 bp, + strand
From VEGA annotation of GRCm38

  12055 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:69477  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog

Protein SuperFamily: cyclin, L type
Gene Tree: Ccnl2

Human
homologs
Human Homolog CCNL2, cyclin L2
NCBI Gene ID 81669
neXtProt AC  NX_Q96S94
Human Synonyms  ANIA-6B, CCNM, CCNS, HCLA-ISO, HLA-ISO, PCEE, SB138
Human Chr (Location)  1p36.33; chr1:1385711-1399338 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(17) : Gene trapped(14) Targeted(3)
Incidental mutations (data from APF )
Interactions
Ccnl2 interacts with 225 markers (Mir7-1, Mir9-1, Mir9-2, ...)
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)    Images (18)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(20)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(21) cDNA(20) Primer pair(1)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000010853 (Evidence)
Ensembl Gene ModelENSMUSG00000029068 (Evidence)
Entrez Gene56036 (Evidence)
DFCITC1758335, TC1572862, TC1596706, TC1587270
DoTSDT.110840538, DT.101281776, DT.94173216, DT.110840563, DT.97404800, DT.97378899
NIA Mouse Gene IndexU005219
Consensus CDS ProjectCCDS19042.1
International Mouse Knockout Project StatusCcnl2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000010853 VEGA Gene Model | MGI Sequence Detail 12055 C57BL/6J ±  kb
transcript OTTMUST00000025394 VEGA | MGI Sequence Detail 2442 Not Applicable 
polypeptide OTTMUSP00000011643 VEGA | MGI Sequence Detail 518 Not Applicable 

For the selected sequences
All sequences(64) RefSeq(3) UniProt(5)
Polymorphisms
SNPs within 2kb(144 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR015429 Cyclin C/H/T/L
InterPro IPR004367 Cyclin, C-terminal domain
InterPro IPR017060 Cyclin L
InterPro IPR013763 Cyclin-like
InterPro IPR006671 Cyclin, N-terminal
Protein Ontology PR:000005137 cyclin-L2
References
(Earliest) J:30420 Cheng H, et al., Patterns of gene expression along the crypt-villus axis in mouse jejunal epithelium. Anat Rec. 1996 Jan;244(1):78-94
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(45)
Other
accession IDs
MGI:1913517, MGI:1922723, MGI:1923779, MGI:2140567, MGI:2140748

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory