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Impg1 Gene Detail
Summary
  • Symbol
    Impg1
  • Name
    interphotoreceptor matrix proteoglycan 1
  • Synonyms
    A930015H12Rik, IMP150, SPACR
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926876
    NCBI Gene: 63859
  • Gene Overview
    MyGene.info: IMPG1
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:80313330-80465481 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 43.99 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1548 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1926876
protein coding gene Chr9:80311792-80465654 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035080
protein coding gene Chr9:80899406-81041689 (-)
A/J MGP_AJ_G0035061
protein coding gene Chr9:78109990-78242290 (-)
AKR/J MGP_AKRJ_G0034989
protein coding gene Chr9:79953061-80082084 (-)
BALB/cJ MGP_BALBcJ_G0035049
protein coding gene Chr9:77740294-77870664 (-)
C3H/HeJ MGP_C3HHeJ_G0034761
protein coding gene Chr9:80467322-80602380 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035572
protein coding gene Chr9:83074203-83221414 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032479
protein coding gene Chr9:77244530-77379270 (-)
CAST/EiJ MGP_CASTEiJ_G0034079
protein coding gene Chr9:80816892-80962354 (-)
CBA/J MGP_CBAJ_G0034734
protein coding gene Chr9:86039739-86184660 (-)
DBA/2J MGP_DBA2J_G0034892
protein coding gene Chr9:77721657-77861418 (-)
FVB/NJ MGP_FVBNJ_G0034835
protein coding gene Chr9:76934259-77059799 (-)
LP/J MGP_LPJ_G0034973
protein coding gene Chr9:81137651-81274917 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034877
protein coding gene Chr9:87265924-87403915 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035593
protein coding gene Chr9:80173554-80305592 (-)
PWK/PhJ MGP_PWKPhJ_G0033783
protein coding gene Chr9:77923726-78058364 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033619
protein coding gene Chr9:80303149-80451830 (-)
WSB/EiJ MGP_WSBEiJ_G0034196
protein coding gene Chr9:80093439-80233281 (-)



Homology
more
  • Human Ortholog
    IMPG1, interphotoreceptor matrix proteoglycan 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    IMPG1, interphotoreceptor matrix proteoglycan 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    GP147, IPM150, SPACR, VMD4
  • Links
    NCBI Gene ID: 3617
    neXtProt AC: NX_Q17R60
    UniProt: Q17R60

  • Chr Location
    6q14.1; chr6:75921114-76072678 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 1201
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: IMPG1
  • Gene Tree
Human Diseases
more
  • Diseases
    1 with human IMPG1 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000032343 Ensembl Gene Model | MGI Sequence Detail 152152 C57BL/6J ±  kb
transcript ENSMUST00000113250 Ensembl | MGI Sequence Detail 2965 Not Applicable  
polypeptide ENSMUSP00000108876 Ensembl | MGI Sequence Detail 798 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 9
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1925209
References
more
  • Summaries
    All 21
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:64992 Lee JW, et al., SPACR in the interphotoreceptor matrix of the mouse retina: molecular, biochemical and immunohistochemical characterization. Exp Eye Res. 2000 Oct;71(4):341-52
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory