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Mrpl38 Gene Detail
Summary
  • Symbol
    Mrpl38
  • Name
    mitochondrial ribosomal protein L38
  • Synonyms
    1110036N21Rik, 4733401F03Rik, MRP-L3, Rpml3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926269
    NCBI Gene: 60441
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:116131817-116138868 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 80.91 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    30 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1926269
 protein coding gene Chr11:116131817-116138868 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019416
 protein coding gene Chr11:120221369-120228419 (-)
A/J MGP_AJ_G0019385
 protein coding gene Chr11:114969229-114976531 (-)
AKR/J MGP_AKRJ_G0019355
 protein coding gene Chr11:118395788-118402813 (-)
BALB/cJ MGP_BALBcJ_G0019359
 protein coding gene Chr11:115379553-115386576 (-)
C3H/HeJ MGP_C3HHeJ_G0019165
 protein coding gene Chr11:118749968-118757010 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019809
 protein coding gene Chr11:123908370-123915413 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017432
 protein coding gene Chr11:111982633-111989559 (-)
CAST/EiJ MGP_CASTEiJ_G0018720
 protein coding gene Chr11:120104862-120111896 (-)
CBA/J MGP_CBAJ_G0019137
 protein coding gene Chr11:128793971-128801016 (-)
DBA/2J MGP_DBA2J_G0019248
 protein coding gene Chr11:114385251-114392268 (-)
FVB/NJ MGP_FVBNJ_G0019240
 protein coding gene Chr11:113900262-113907313 (-)
LP/J MGP_LPJ_G0019318
 protein coding gene Chr11:120602304-120609351 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019273
 protein coding gene Chr11:127884527-127891577 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019847
 protein coding gene Chr11:119056331-119063381 (-)
PWK/PhJ MGP_PWKPhJ_G0018484
 protein coding gene Chr11:115722624-115729828 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018277
 protein coding gene Chr11:118809007-118816631 (-)
WSB/EiJ MGP_WSBEiJ_G0018772
 protein coding gene Chr11:119019247-119026290 (-)



Homology
more
  • Human Ortholog
    MRPL38, mitochondrial ribosomal protein L38
  • Vertebrate Orthologs
    10
  • Human Ortholog
    MRPL38, mitochondrial ribosomal protein L38
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HSPC262, L38MT, MRP-L3, MRP-L38, RPML3
  • Links
    NCBI Gene ID: 64978
    neXtProt AC: NX_Q96DV4
    UniProt: Q96DV4

  • Chr Location
    17q25.1; chr17:75898643-75905100 (-)  GRCh38.p7
  • HomoloGene
    Vertebrate Homology Class 11476
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: MRPL38
  • Gene Tree
    Mrpl38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    32
  • Tissues
    4
  • cDNA Data
    104
  • Literature Summary
    1
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 60441 NCBI Gene Model | MGI Sequence Detail 7052 C57BL/6J ±  kb
transcript NM_024177 RefSeq | MGI Sequence Detail 1411 C57BL/6  
polypeptide Q8K2M0 UniProt | EBI | MGI Sequence Detail 380 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 105
    cDNA 105

    Microarray probesets 4
Other
Accession IDs
less
MGI:1913960, MGI:1923570, MGI:2144707
References
more
  • Summaries
    All 37
    Developmental Gene Expression 1
    Gene Ontology 6
    Phenotypes 8
  • Earliest
    J:64919 Graack HR, et al., Identification of mammalian mitochondrial ribosomal proteins (MRPs) by N-terminal sequencing of purified bovine MRPs and comparison to data bank sequences: the large subribosomal particle. Biochemistry. 1999 Dec 14;38(50):16569-77
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
03/13/2019
MGI 6.13 		The Jackson Laboratory