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Mrps30 Gene Detail
Summary
  • Symbol
    Mrps30
  • Name
    mitochondrial ribosomal protein S30
  • Synonyms
    2610020A16Rik, Pdcd9
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926237
    NCBI Gene: 59054
  • Gene Overview
    MyGene.info: MRPS30
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:118380110-118387252 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 66.88 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    87 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1926237
protein coding gene Chr13:118378381-118387252 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020966
protein coding gene Chr13:121347132-121354274 (-)
A/J MGP_AJ_G0020916
protein coding gene Chr13:116443701-116450976 (-)
AKR/J MGP_AKRJ_G0020891
protein coding gene Chr13:119881132-119888352 (-)
BALB/cJ MGP_BALBcJ_G0020916
protein coding gene Chr13:117151142-117158362 (-)
C3H/HeJ MGP_C3HHeJ_G0020705
protein coding gene Chr13:119713009-119720161 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021352
protein coding gene Chr13:124835116-124842258 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018921
protein coding gene Chr13:111508110-111515423 (-)
CAST/EiJ MGP_CASTEiJ_G0020224
protein coding gene Chr13:119515331-119558337 (-)
CBA/J MGP_CBAJ_G0020667
protein coding gene Chr13:129710671-129717813 (-)
DBA/2J MGP_DBA2J_G0020790
protein coding gene Chr13:116059507-116066649 (-)
FVB/NJ MGP_FVBNJ_G0020774
protein coding gene Chr13:114692811-114700031 (-)
LP/J MGP_LPJ_G0020866
protein coding gene Chr13:121312522-121319667 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020802
protein coding gene Chr13:130242749-130249969 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021388
protein coding gene Chr13:119384588-119391730 (-)
PWK/PhJ MGP_PWKPhJ_G0019977
protein coding gene Chr13:114900155-114941598 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019800
protein coding gene Chr13:115770897-115813067 (-)
WSB/EiJ MGP_WSBEiJ_G0020282
protein coding gene Chr13:120069717-120076934 (-)



Homology
more
  • Human Ortholog
    MRPS30, mitochondrial ribosomal protein S30
  • Vertebrate Orthologs
    11
  • Human Ortholog
    MRPS30, mitochondrial ribosomal protein S30
    Orthology source: HGNC, HomoloGene
  • Synonyms
    MRP-S30, PAP, PDCD9, S30mt
  • Links
    NCBI Gene ID: 10884
    neXtProt AC: NX_Q9NP92
    UniProt: Q9NP92

  • Chr Location
    5p12; chr5:44808925-44815514 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 9607
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;2 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: MRPS30
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 59054 NCBI Gene Model | MGI Sequence Detail 7143 C57BL/6J ±  kb
transcript NM_021556 RefSeq | MGI Sequence Detail 1590 C57BL/6  
polypeptide Q9D0G0 UniProt | EBI | MGI Sequence Detail 442 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 58
    cDNA 58

    Microarray probesets 3
Other
Accession IDs
less
MGI:1914301, MGI:2145176
References
more
  • Summaries
    All 33
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory