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Tmem27
Gene Detail
Symbol

Name
ID
Tmem27
transmembrane protein 27
MGI:1926234
Synonyms
0610008J07Rik, collectrin, NX17, NX=17
Feature Type
protein coding gene
Genetic Map
Chromosome X
76.12 cM, cytoband F5
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
ChrX:164088830-164118860 bp, + strand
From VEGA annotation of GRCm38

  30031 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:10767  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Tmem27

Human
homologs
Human Homolog TMEM27, transmembrane protein 27
NCBI Gene ID 57393
neXtProt AC  NX_Q9HBJ8
Human Synonyms  NX17, NX-17
Human Chr (Location)  Xp22; chrX:15627316-15665031 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(11) : Gene trapped(5) Targeted(6)
 
Homozygous mutation of this gene result in defects in renal amino acid uptake.
 
Interactions
Tmem27 interacts with 126 markers (Mir7-1, Mir10a, Mir16-1, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (6 records)
Data Summary: Results (29)    Tissues (28)    Images (5)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 29
cDNA source data(99)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(99) cDNA(99)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000019509 (Evidence)
Ensembl Gene ModelENSMUSG00000015401 (Evidence)
Entrez Gene57394 (Evidence)
UniGene143766
DFCITC1574801
DoTSDT.492354
NIA Mouse Gene IndexU020382
Consensus CDS ProjectCCDS30517.1
International Mouse Knockout Project StatusTmem27
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000019509 VEGA Gene Model | MGI Sequence Detail 30031 C57BL/6J ±  kb
transcript OTTMUST00000046591 VEGA | MGI Sequence Detail 1389 Not Applicable 
polypeptide OTTMUSP00000021040 VEGA | MGI Sequence Detail 222 Not Applicable 

For the selected sequences
All sequences(27) RefSeq(4) UniProt(2)
Polymorphisms
SNPs within 2kb(129 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001548 Peptidase M2, peptidyl-dipeptidase A
Protein Ontology PR:000016422 collectrin
References
(Earliest) J:65057 Zhang H, et al., Screening for genes up-regulated in 5/6 nephrectomized mouse kidney. Kidney Int. 1999 Aug;56(2):549-58
(Latest) J:186775 Hashimoto T, et al., ACE2 links amino acid malnutrition to microbial ecology and intestinal inflammation. Nature. 2012 Jul 26;487(7408):477-81
All references(46)
Other
accession IDs
MGI:1915565

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory