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Nup160 Gene Detail
Summary
  • Symbol
    Nup160
  • Name
    nucleoporin 160
  • Synonyms
    2810011M03Rik, Gtl1-13
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926227
    NCBI Gene: 59015
  • Gene Overview
    MyGene.info: NUP160
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:90677215-90736328 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 50.32 cM, cytoband E1
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    84 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1926227
protein coding gene Chr2:90677215-90739327 (.)
129S1/SvImJ MGP_129S1SvImJ_G0026130
protein coding gene Chr2:91947218-92007785 (+)
A/J MGP_AJ_G0026091
protein coding gene Chr2:88279973-88340185 (+)
AKR/J MGP_AKRJ_G0026072
protein coding gene Chr2:90722352-90783842 (+)
BALB/cJ MGP_BALBcJ_G0026100
protein coding gene Chr2:88435536-88495271 (+)
C3H/HeJ MGP_C3HHeJ_G0025851
protein coding gene Chr2:90995032-91058332 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026551
protein coding gene Chr2:95182063-95246304 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023941
protein coding gene Chr2:84798157-84862375 (+)
CAST/EiJ MGP_CASTEiJ_G0025316
protein coding gene Chr2:91502532-91563318 (+)
CBA/J MGP_CBAJ_G0025829
protein coding gene Chr2:98424557-98491220 (+)
DBA/2J MGP_DBA2J_G0025965
protein coding gene Chr2:87879207-87938397 (+)
FVB/NJ MGP_FVBNJ_G0025928
protein coding gene Chr2:86975547-87035663 (+)
LP/J MGP_LPJ_G0026069
protein coding gene Chr2:92152877-92217364 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025954
protein coding gene Chr2:101488086-101548439 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0026605
protein coding gene Chr2:90770025-90830986 (+)
PWK/PhJ MGP_PWKPhJ_G0025051
protein coding gene Chr2:87597744-87658586 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024852
protein coding gene Chr2:90356920-90420415 (+)
WSB/EiJ MGP_WSBEiJ_G0025383
protein coding gene Chr2:91350317-91414512 (+)



Homology
more
  • Human Ortholog
    NUP160, nucleoporin 160
  • Vertebrate Orthologs
    8
  • Human Ortholog
    NUP160, nucleoporin 160
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 23279
    neXtProt AC: NX_Q12769
    UniProt: Q12769

  • Chr Location
    11p11.2; chr11:47778083-47848544 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000051329 Ensembl Gene Model | MGI Sequence Detail 59114 C57BL/6J ±  kb
transcript ENSMUST00000057481 Ensembl | MGI Sequence Detail 5684 Not Applicable  
polypeptide ENSMUSP00000059289 Ensembl | MGI Sequence Detail 1402 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 118
    cDNA 117
    Other 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:1917661, MGI:2138773, MGI:2139185
References
more
  • Summaries
    All 42
    Gene Ontology 6
    Phenotypes 10
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:227263 Fabre PJ, et al., Nanoscale spatial organization of the HoxD gene cluster in distinct transcriptional states. Proc Natl Acad Sci U S A. 2015 Nov 10;112(45):13964-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory