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Slc22a17 Gene Detail
Summary
  • Symbol
    Slc22a17
  • Name
    solute carrier family 22 (organic cation transporter), member 17
  • Synonyms
    1700094C23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926225
    NCBI Gene: 59049
  • Alliance
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:54906304-54913132 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 27.99 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    82 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1926225
protein coding gene Chr14:54906304-54913725 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021330
protein coding gene Chr14:48888455-48894878 (-)
A/J MGP_AJ_G0021289
protein coding gene Chr14:47925014-47931113 (-)
AKR/J MGP_AKRJ_G0021265
protein coding gene Chr14:49670077-49676185 (-)
BALB/cJ MGP_BALBcJ_G0021293
protein coding gene Chr14:47902456-47908541 (-)
C3H/HeJ MGP_C3HHeJ_G0021073
protein coding gene Chr14:49362378-49368489 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021731
protein coding gene Chr14:51360782-51366888 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019278
protein coding gene Chr14:46336919-46343233 (-)
CAST/EiJ MGP_CASTEiJ_G0020592
protein coding gene Chr14:45601120-45607222 (-)
CBA/J MGP_CBAJ_G0021040
protein coding gene Chr14:52919036-52925143 (-)
DBA/2J MGP_DBA2J_G0021161
protein coding gene Chr14:47665779-47671876 (-)
FVB/NJ MGP_FVBNJ_G0021143
protein coding gene Chr14:47122999-47129455 (-)
LP/J MGP_LPJ_G0021235
protein coding gene Chr14:49908856-49915278 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021167
protein coding gene Chr14:52302960-52309073 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021758
protein coding gene Chr14:48847500-48853614 (-)
PWK/PhJ MGP_PWKPhJ_G0020339
protein coding gene Chr14:44201267-44207377 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020167
protein coding gene Chr14:44831219-44837675 (-)
WSB/EiJ MGP_WSBEiJ_G0020645
protein coding gene Chr14:49138743-49145625 (-)



Homology
more
  • Human Ortholog
    SLC22A17, solute carrier family 22 member 17
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SLC22A17, solute carrier family 22 member 17
    Orthology source: HGNC, HomoloGene
  • Synonyms
    24p3R, BOCT, BOIT, hBOIT, NGALR, NGALR2, NGALR3
  • Links
    NCBI Gene ID: 51310
    neXtProt AC: NX_Q8WUG5
    UniProt: Q8WUG5

  • Chr Location
    14q11.2; chr14:23346304-23354991 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    2
  • Genomic Mutations
    1 involving Slc22a17
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022199 Ensembl Gene Model | MGI Sequence Detail 6829 C57BL/6J ±  kb
transcript ENSMUST00000228495 Ensembl | MGI Sequence Detail 2340 Not Applicable  
polypeptide ENSMUSP00000154165 Ensembl | MGI Sequence Detail 627 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 90
    cDNA 89
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1920806, MGI:2145759, MGI:2145839
References
more
  • Summaries
    All 33
    Developmental Gene Expression 3
    Gene Ontology 5
    Phenotypes 3
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:231595 Gurdziel K, et al., Transcriptome of the inner circular smooth muscle of the developing mouse intestine: Evidence for regulation of visceral smooth muscle genes by the hedgehog target gene, cJun. Dev Dyn. 2016 May;245(5):614-26

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory