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Slc22a17 Gene Detail
Summary
  • Symbol
    Slc22a17
  • Name
    solute carrier family 22 (organic cation transporter), member 17
  • Synonyms
    1700094C23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926225
    NCBI Gene: 59049
Location & Maps
more
  • Sequence Map
    Chr14:54906727-54913132 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      6406 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 27.99 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SLC22A17, solute carrier family 22 member 17
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SLC22A17, solute carrier family 22 member 17
    Orthology source: HGNC, HomoloGene
  • Synonyms
    24p3R, BOCT, BOIT, hBOIT, NGALR, NGALR2, NGALR3
  • Links
    NCBI Gene ID: 51310
    neXtProt AC: NX_Q8WUG5

  • Chr Location
    14q11.2; chr14:23346311-23354976 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotype references
  • All Mutations and Alleles
    1
  • Chemically induced (other)
    1
  • Genomic Mutations
    1 involving Slc22a17
  • Incidental Mutations
    APF , CvDC
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022199 Ensembl Gene Model | MGI Sequence Detail 6406 C57BL/6J ±  kb
transcript ENSMUST00000050772 Ensembl | MGI Sequence Detail 2294 Not Applicable  
polypeptide ENSMUSP00000049676 Ensembl | MGI Sequence Detail 401 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    81 from dbSNP Build 142
Protein
Information
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  • UniProt
    5 Sequences
  • Protein Ontology
    PR:000032765 solute carrier family 22 member 17
  • InterPro Domains
    IPR005828 Major facilitator, sugar transporter-like
    IPR011701 Major facilitator superfamily
    IPR020846 Major facilitator superfamily domain
    IPR005829 Sugar transporter, conserved site
Molecular
Reagents
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  • All nucleic 89
    cDNA 88
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
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MGI:1920806, MGI:2145759, MGI:2145839
References
more
  • Summaries
    All 30
    Developmental Gene Expression 3
    Gene Ontology 6
    Phenotypes 2
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:231595 Gurdziel K, et al., Transcriptome of the inner circular smooth muscle of the developing mouse intestine: Evidence for regulation of visceral smooth muscle genes by the hedgehog target gene, cJun. Dev Dyn. 2016 May;245(5):614-26

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/23/2016
MGI 6.05
The Jackson Laboratory