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Cenpk
Gene Detail
Symbol

Name
ID
Cenpk
centromere protein K
MGI:1926210
Synonyms
B130045K24Rik, C530004N04Rik, Solt
Feature Type
protein coding gene
Genetic Map
Chromosome 13
56.42 cM, cytoband D1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr13:104228955-104249615 bp, + strand
From Ensembl annotation of GRCm38

  20661 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:11035  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: CENPK
Gene Tree: Cenpk

Human
homologs
CENPK, centromere protein K
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 64105
neXtProt AC: NX_Q9BS16

Human Synonyms: AF5alpha, CENP-K, FKSG14, P33, Solt

Human Chr (Location): 5q12.3; chr5:65508067-65563189 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(6) : Gene trapped(4) Targeted(2)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Cenpk interacts with 75 markers (Mir7-1, Mir19a, Mir19b-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process positive regulation of transcription from RNA polymerase II promoter
Component chromosome, chromosome, centromeric region, ...
Function protein binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (17)    Tissues (10)    Images (15)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 17
cDNA source data(24)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase cenpk    NEW 
Molecular
reagents
All nucleic(27) cDNA(25) Other(2)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000021714 (Evidence)
Entrez Gene 60411 (Evidence)
UniGene 281498
NIA Mouse Gene Index U015211, U331997
Consensus CDS Project CCDS26749.1, CCDS26750.1
International Mouse Phenotyping Consortium Status Cenpk
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000021714 Ensembl Gene Model | MGI Sequence Detail 20661 C57BL/6J ±  kb
transcript ENSMUST00000022227 Ensembl | MGI Sequence Detail 1215 Not Applicable 
polypeptide ENSMUSP00000022227 Ensembl | MGI Sequence Detail 306 Not Applicable 

For the selected sequences
All sequences(31) RefSeq(7) UniProt(1)
Polymorphisms
SNPs within 2kb(116 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR020993 Centromere protein Cenp-K
Protein Ontology PR:000005331 centromere protein K
References
(Earliest) J:64789 Yamashita A, et al., Characterization of Solt, a novel SoxLZ/Sox6 binding protein expressed in adult mouse testis. FEBS Lett. 2000 Sep 15;481(2):147-51
(Latest) J:152068 Friedel RH, et al., EUCOMM--the European conditional mouse mutagenesis program. Brief Funct Genomic Proteomic. 2007 Sep;6(3):180-5
All references(28)
Other
accession IDs
MGI:1924910, MGI:2445170, MGI:3034982

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
05/20/2015
MGI 5.22
The Jackson Laboratory