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Saal1 Gene Detail
Summary
  • Symbol
    Saal1
  • Name
    serum amyloid A-like 1
  • Synonyms
    5031425D22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926185
    NCBI Gene: 78935
  • Member of
    Saa cluster
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:46686108-46710680 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 30.48 cM, cytoband B3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    306 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1926185
 protein coding gene Chr7:46686108-46710692 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032267
 protein coding gene Chr7:47074827-47101186 (-)
A/J MGP_AJ_G0032246
 protein coding gene Chr7:46094729-46131183 (-)
AKR/J MGP_AKRJ_G0032182
 protein coding gene Chr7:47394620-47418734 (-)
BALB/cJ MGP_BALBcJ_G0032258
 protein coding gene Chr7:46107167-46131434 (-)
C3H/HeJ MGP_C3HHeJ_G0031973
 protein coding gene Chr7:47892440-47916652 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032750
 protein coding gene Chr7:49346570-49372537 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029764
 protein coding gene Chr7:48650263-48672279 (-)
CAST/EiJ MGP_CASTEiJ_G0031301
 protein coding gene Chr7:39337043-39360766 (-)
CBA/J MGP_CBAJ_G0031938
 protein coding gene Chr7:50994731-51025429 (-)
DBA/2J MGP_DBA2J_G0032095
 protein coding gene Chr7:45787336-45811703 (-)
FVB/NJ MGP_FVBNJ_G0032047
 protein coding gene Chr7:45583843-45608801 (-)
LP/J MGP_LPJ_G0032174
 protein coding gene Chr7:47765963-47797173 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0032084
 protein coding gene Chr7:49609269-49633218 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032765
 protein coding gene Chr7:46612895-46639449 (-)
PWK/PhJ MGP_PWKPhJ_G0031024
 protein coding gene Chr7:39166844-39190973 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030862
 protein coding gene Chr7:34633343-34660875 (-)
WSB/EiJ MGP_WSBEiJ_G0031419
 protein coding gene Chr7:47120103-47143079 (-)



Homology
more
  • Human Ortholog
    SAAL1, serum amyloid A like 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SAAL1, serum amyloid A like 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    SPACIA1
  • Links
    NCBI Gene ID: 113174
    neXtProt AC: NX_Q96ER3
    UniProt: Q96ER3

  • Chr Location
    11p15.1; chr11:18080343-18106091 (-)  GRCh38.p7
  • HomoloGene
    Vertebrate Homology Class 34706
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: SAAL1
  • Gene Tree
    Saal1
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
    61
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000006763 Ensembl Gene Model | MGI Sequence Detail 24573 C57BL/6J ±  kb
transcript ENSMUST00000143082 Ensembl | MGI Sequence Detail 4728 Not Applicable  
polypeptide ENSMUSP00000120658 Ensembl | MGI Sequence Detail 474 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR016024 Armadillo-type fold
Molecular
Reagents
less
  • All nucleic 61
    cDNA 61

    Microarray probesets 5
References
more
  • Summaries
    All 30
    Gene Ontology 3
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
03/13/2019
MGI 6.13 		The Jackson Laboratory