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Saal1 Gene Detail
Summary
  • Symbol
    Saal1
  • Name
    serum amyloid A-like 1
  • Synonyms
    5031425D22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926185
    NCBI Gene: 78935
  • Member of
    Saa cluster
Location & Maps
more
  • Sequence Map
    Chr7:46686108-46710680 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      24573 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 30.48 cM, cytoband B3
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    SAAL1, serum amyloid A like 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SAAL1, serum amyloid A like 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    SPACIA1
  • Links
    NCBI Gene ID: 113174
    neXtProt AC: NX_Q96ER3

  • Chr Location
    11p15.1; chr11:18080343-18106091 (-)  GRCh38.p2
  • HomoloGene
    Vertebrate Homology Class 34706
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed
  • HCOP
    human homology predictions: SAAL1
  • Gene Tree
    Saal1
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    12
  • Gene trapped
    10
  • Targeted
    2
  • Incidental Mutations
    Mutagenetix , APF
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
    60
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023947 VEGA Gene Model | MGI Sequence Detail 24573 C57BL/6J ±  kb
transcript OTTMUST00000058523 VEGA | MGI Sequence Detail 4728 Not Applicable  
polypeptide OTTMUSP00000028362 VEGA | MGI Sequence Detail 474 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    306 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 60
    cDNA 60

    Microarray probesets 5
References
more
  • Summaries
    All 29
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/27/2016
MGI 6.05 		The Jackson Laboratory