About   Help   FAQ
Pigt
Gene Detail
Symbol

Name
ID
Pigt
phosphatidylinositol glycan anchor biosynthesis, class T
MGI:1926178
Synonyms
2510012P17Rik, 4930534E15Rik, CGI-06, NDAP, Ndap7
Feature Type
protein coding gene
Genetic Map
Chromosome 2
85.17 cM, cytoband H3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr2:164497520-164508301 bp, + strand
From VEGA annotation of GRCm38

  10782 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:6134  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: PIGT
Protein SuperFamily: GPI transamidase, PIG-T component
Gene Tree: Pigt

Human
homologs
PIGT, phosphatidylinositol glycan anchor biosynthesis, class T
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 51604
neXtProt AC: NX_Q969N2

Human Synonyms: CGI-06, MCAHS3, NDAP, PNH2

Human Chr (Location): 20q13.12; chr20:45416067-45426245 (+)  GRCh38.p2

Disease Associations: (2) Diseases Associated with Human PIGT

Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Interactions
Pigt interacts with 261 markers (Mir1b, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process attachment of GPI anchor to protein, GPI anchor biosynthetic process, ...
Component cytoplasm, cytoplasmic membrane-bounded vesicle, ...
Function GPI-anchor transamidase activity
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(69)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase pigt    NEW 
Molecular
reagents
All nucleic(69) cDNA(69)
Microarray probesets(6)
Other database
links
VEGA Gene Model OTTMUSG00000001092 (Evidence)
Ensembl Gene Model ENSMUSG00000017721 (Evidence)
Entrez Gene 78928 (Evidence)
UniGene 28228
DFCI TC1663432, TC1594637, TC1582246, TC1575552, TC1597656
DoTS DT.530372, DT.94230021, DT.101736808, DT.101157906, DT.94230024, DT.97388876
NIA Mouse Gene Index U002809
Consensus CDS Project CCDS17038.2
International Mouse Phenotyping Consortium Status Pigt
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000001092 VEGA Gene Model | MGI Sequence Detail 10782 C57BL/6J ±  kb
transcript OTTMUST00000002147 VEGA | MGI Sequence Detail 2562 Not Applicable 
polypeptide OTTMUSP00000001046 VEGA | MGI Sequence Detail 582 Not Applicable 

For the selected sequences
All sequences(62) RefSeq(4) UniProt(5)
Polymorphisms
SNPs within 2kb(124 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007245 GPI transamidase component PIG-T
Protein Ontology PR:000012707 GPI transamidase component PIG-T
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:161922 Tang T, et al., A mouse knockout library for secreted and transmembrane proteins. Nat Biotechnol. 2010 Jul;28(7):749-55
All references(30)
Other
accession IDs
MGI:1919706

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/21/2015
MGI 5.22
The Jackson Laboratory