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1500015O10Rik
Gene Detail
Symbol

Name
ID
1500015O10Rik
RIKEN cDNA 1500015O10 gene
MGI:1926146
Synonyms
Ecrg4
Feature Type
protein coding gene
Genetic Map
Chromosome 1
23.44 cM, cytoband C1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:43730602-43742578 bp, + strand
From VEGA annotation of GRCm38

  11977 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:11505  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

Gene Tree: 1500015O10Rik

Human
homologs
Human Homolog C2orf40, chromosome 2 open reading frame 40
NCBI Gene ID 84417
neXtProt AC  NX_Q9H1Z8
Human Synonyms  ECRG4
Human Chr (Location)  2q12.2; chr2:106064298-106078155 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
1500015O10Rik interacts with 15 markers (Mir127, Mir130a, Mir138-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process cellular senescence, cyclin catabolic process, ...
Component cytoplasmic vesicle, extracellular region, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (125)    Tissues (36)    Images (23)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 125
cDNA source data(21)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(21) cDNA(21)
Microarray probesets(7)
Other database
links
VEGA Gene ModelOTTMUSG00000020869 (Evidence)
Ensembl Gene ModelENSMUSG00000026051 (Evidence)
Entrez Gene78896 (Evidence)
UniGene50109
DFCITC1582840
DoTSDT.527580
NIA Mouse Gene IndexU000228
Consensus CDS ProjectCCDS14925.1
International Mouse Knockout Project Status1500015O10Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000020869 VEGA Gene Model | MGI Sequence Detail 11977 C57BL/6J ±  kb
transcript OTTMUST00000049335 VEGA | MGI Sequence Detail 902 Not Applicable 
polypeptide OTTMUSP00000022833 VEGA | MGI Sequence Detail 148 Not Applicable 

For the selected sequences
All sequences(20) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(145 from dbSNP Build 137)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:199302 Veenvliet JV, et al., Specification of dopaminergic subsets involves interplay of En1 and Pitx3. Development. 2013 Aug;140(16):3373-84
All references(31)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory