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1500015O10Rik Gene Detail
Summary
  • Symbol
    1500015O10Rik
  • Name
    RIKEN cDNA 1500015O10 gene
  • Synonyms
    augurin, Ecrg4
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926146
    NCBI Gene: 78896
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:43730602-43742564 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 23.44 cM, cytoband C1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    145 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1926146
protein coding gene Chr1:43730602-43742578 (.)
129S1/SvImJ MGP_129S1SvImJ_G0015981
protein coding gene Chr1:42759634-42771595 (+)
A/J MGP_AJ_G0015965
protein coding gene Chr1:41431700-41443641 (+)
AKR/J MGP_AKRJ_G0015920
protein coding gene Chr1:42009712-42023838 (+)
BALB/cJ MGP_BALBcJ_G0015919
protein coding gene Chr1:41117358-41129333 (+)
C3H/HeJ MGP_C3HHeJ_G0015752
protein coding gene Chr1:42387322-42399283 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016372
protein coding gene Chr1:44474139-44491033 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014094
protein coding gene Chr1:38262495-38274205 (+)
CAST/EiJ MGP_CASTEiJ_G0015333
protein coding gene Chr1:42393437-42405305 (+)
CBA/J MGP_CBAJ_G0015724
protein coding gene Chr1:45794302-45806265 (+)
DBA/2J MGP_DBA2J_G0015825
protein coding gene Chr1:40727035-40742028 (+)
FVB/NJ MGP_FVBNJ_G0015827
protein coding gene Chr1:40238494-40250477 (+)
LP/J MGP_LPJ_G0015895
protein coding gene Chr1:43074026-43085999 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015847
protein coding gene Chr1:47750062-47762031 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016419
protein coding gene Chr1:42222325-42235162 (+)
PWK/PhJ MGP_PWKPhJ_G0015116
protein coding gene Chr1:40603684-40615769 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014898
protein coding gene Chr1:42210920-42222732 (+)
WSB/EiJ MGP_WSBEiJ_G0015395
protein coding gene Chr1:42262199-42274180 (+)



Homology
more
  • Human Ortholog
    C2orf40, chromosome 2 open reading frame 40
  • Vertebrate Orthologs
    11
  • Human Ortholog
    C2orf40, chromosome 2 open reading frame 40
    Orthology source: HGNC, HomoloGene
  • Synonyms
    ECRG4
  • Links
    NCBI Gene ID: 84417
    neXtProt AC: NX_Q9H1Z8
    UniProt: Q9H1Z8

  • Chr Location
    2q12.2; chr2:106063290-106078155 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    8 phenotype references
No notable pheontype was detected in high throughput screens of homozygous mice.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 78896 NCBI Gene Model | MGI Sequence Detail 11963 C57BL/6J ±  kb
transcript NM_024283 RefSeq | MGI Sequence Detail 888 C57BL/6  
polypeptide Q99LS0 UniProt | EBI | MGI Sequence Detail 148 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR028173 Augurin
Molecular
Reagents
less
  • All nucleic 24
    cDNA 23
    Primer pair 1

    Microarray probesets 7
References
more
  • Summaries
    All 33
    Developmental Gene Expression 5
    Gene Ontology 3
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:256105 Mendelsohn AI, et al., Divergent Hox Coding and Evasion of Retinoid Signaling Specifies Motor Neurons Innervating Digit Muscles. Neuron. 2017 Feb 22;93(4):792-805.e4

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory