About   Help   FAQ
Cnot10 Gene Detail
Summary
  • Symbol
    Cnot10
  • Name
    CCR4-NOT transcription complex, subunit 10
  • Synonyms
    2600001P13Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926143
    NCBI Gene: 78893
Location & Maps
more
  • Sequence Map
    Chr9:114585878-114640200 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      54323 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 64.72 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CNOT10, CCR4-NOT transcription complex subunit 10
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CNOT10, CCR4-NOT transcription complex subunit 10
    Orthology source: HomoloGene
  • Links
    NCBI Gene ID: 25904
    neXtProt AC: NX_Q9H9A5

  • Chr Location
    3p22.3; chr3:32685145-32773875 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000056167 Ensembl Gene Model | MGI Sequence Detail 54323 C57BL/6J ±  kb
transcript ENSMUST00000070117 Ensembl | MGI Sequence Detail 2979 Not Applicable  
polypeptide ENSMUSP00000064840 Ensembl | MGI Sequence Detail 744 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    373 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000005649 CCR4-NOT transcription complex subunit 10
  • InterPro Domains
    IPR011990 Tetratricopeptide-like helical domain
    IPR019734 Tetratricopeptide repeat
Molecular
Reagents
less
  • All nucleic 17
    cDNA 17

    Microarray probesets 3
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:174695 Chen C, et al., Distinct expression patterns of the subunits of the CCR4-NOT deadenylase complex during neural development. Biochem Biophys Res Commun. 2011 Jul 29;411(2):360-4

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/17/2016
MGI 6.05
The Jackson Laboratory