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Ftx
Gene Detail
Symbol

Name
ID
Ftx
Ftx transcript, Xist regulator (non-protein coding)
MGI:1926128
Synonyms
B230206F22Rik, Thcytx
Feature Type
lincRNA gene
Genetic Map
Chromosome X
46.21 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
ChrX:103560907-103623754 bp, - strand
From VEGA annotation of GRCm38

  62848 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HCOP human homology predictions: FTX
Gene Tree: Ftx
Human
homologs
FTX, FTX transcript, XIST regulator (non-protein coding)
Orthology source: HGNC

IDs:
NCBI Gene ID: 100302692

Human Synonyms: LINC00182, MIR374AHG, NCRNA00182

Human Chr (Location): Xq13.2; chrX:74028136-74293574 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(5)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process chromatin organization, regulation of DNA methylation, ...
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(6)
Other mouse links: GEO   Expression Atlas
Molecular
reagents
All nucleic(6) cDNA(6)
Other database
links
VEGA Gene Model OTTMUSG00000018310 (Evidence)
Ensembl Gene Model ENSMUSG00000086370 (Evidence)
Entrez Gene 78878 (Evidence)
NIA Mouse Gene Index U039600
International Mouse Phenotyping Consortium Status Ftx
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000018310 VEGA Gene Model | MGI Sequence Detail 62848 C57BL/6J ±  kb
transcript NR_028380 RefSeq | MGI Sequence Detail 4387 C57BL/6 

For the selected sequences
All sequences(27) RefSeq(2)
Polymorphisms
SNPs within 2kb(176 from dbSNP Build 137)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:212497 Barakat TS, et al., The trans-activator RNF12 and cis-acting elements effectuate X chromosome inactivation independent of X-pairing. Mol Cell. 2014 Mar 20;53(6):965-78
All references(19)
Other
accession IDs
MGI:2148043

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory