Ftx
Gene Detail

Symbol Name ID

Ftx Ftx transcript, Xist regulator (non-protein coding) MGI:1926128

Synonyms

B230206F22Rik, Thcytx

Feature Type

unclassified non-coding RNA gene

Genetic Map

Chromosome X

46.21 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

ChrX:103560907-103623754 bp, - strand From VEGA annotation of GRCm38   62848 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

Gene Tree: Ftx

Alleles and phenotypes

All alleles(5) : Gene trapped(5)

Gene Ontology (GO) classifications

All GO classifications: (6 annotations)

Process	chromatin organization, regulation of DNA methylation, ...
Component	cellular_component
Function	molecular_function

External Resources: FuncBase

Expression

cDNA source data(6)
External Resources: GEO   ArrayExpress

Molecular reagents

All nucleic(6) cDNA(6)

Other database links

VEGA Gene Model	OTTMUSG00000018310 (Evidence)
Ensembl Gene Model	ENSMUSG00000086370 (Evidence)
Entrez Gene	78878 (Evidence)
NIA Mouse Gene Index	U039600
International Mouse Knockout Project Status	Ftx

Sequences

Length	Strain/Species
genomic	OTTMUSG00000018310	VEGA Gene Model | MGI Sequence Detail	62848	C57BL/6J
transcript	OTTMUST00000044290	VEGA | MGI Sequence Detail	4275	Not Applicable

All sequences(27) RefSeq(2)

Polymorphisms

SNPs(21 from dbSNP Build 128)

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:168715 Chureau C, et al., Ftx is a non-coding RNA which affects Xist expression and chromatin structure within the X-inactivation center region. Hum Mol Genet. 2011 Feb 15;20(4):705-18
All references(17)

Other accession IDs

MGI:2148043