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Slc25a12 Gene Detail
Summary
  • Symbol
    Slc25a12
  • Name
    solute carrier family 25 (mitochondrial carrier, Aralar), member 12
  • Synonyms
    B230107K20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926080
    NCBI Gene: 78830
  • Gene Overview
    MyGene.info: SLC25A12
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:71274270-71367781 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 42.38 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1166 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1926080
 protein coding gene Chr2:71271063-71367781 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025821
 protein coding gene Chr2:71360872-71462669 (-)
A/J MGP_AJ_G0025798
 protein coding gene Chr2:68575732-68674425 (-)
AKR/J MGP_AKRJ_G0025767
 protein coding gene Chr2:70446884-70550843 (-)
BALB/cJ MGP_BALBcJ_G0025793
 protein coding gene Chr2:68765879-68862953 (-)
C3H/HeJ MGP_C3HHeJ_G0025553
 protein coding gene Chr2:70661074-70762201 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026240
 protein coding gene Chr2:73512034-73624718 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023643
 protein coding gene Chr2:65807756-65903415 (-)
CAST/EiJ MGP_CASTEiJ_G0025017
 protein coding gene Chr2:70851731-70953979 (-)
CBA/J MGP_CBAJ_G0025533
 protein coding gene Chr2:76233904-76348224 (-)
DBA/2J MGP_DBA2J_G0025664
 protein coding gene Chr2:68215690-68313271 (-)
FVB/NJ MGP_FVBNJ_G0025627
 protein coding gene Chr2:67598628-67695601 (-)
LP/J MGP_LPJ_G0025753
 protein coding gene Chr2:71222079-71328889 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025656
 protein coding gene Chr2:78202781-78312772 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026297
 protein coding gene Chr2:70549224-70652686 (-)
PWK/PhJ MGP_PWKPhJ_G0024758
 protein coding gene Chr2:68078305-68179976 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024565
 protein coding gene Chr2:70742530-70846951 (-)
WSB/EiJ MGP_WSBEiJ_G0025085
 protein coding gene Chr2:70980677-71084356 (-)



Homology
more
  • Human Ortholog
    SLC25A12, solute carrier family 25 member 12
  • Vertebrate Orthologs
    8
  • Human Ortholog
    SLC25A12, solute carrier family 25 member 12
    Orthology source: HomoloGene, HGNC
  • Synonyms
    AGC1, ARALAR, EIEE39
  • Links
    NCBI Gene ID: 8604
    neXtProt AC: NX_O75746
    UniProt: O75746

  • Chr Location
    2q31.1; chr2:171783405-171894306 (-)  GRCh38.p7
Human Diseases
more
  • Diseases
    1 with Slc25a12 mouse models; 1 with human SLC25A12 associations

Human Disease Mouse Models
      
IDs
 View 1 model
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    1 with disease annotations
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    31 phenotypes from 1 allele in 1 genetic background
    21 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for a null allele show severe growth defects, generalized tremors, postnatal lethality, impaired motor coordination, and CNS dysmyelination associated with decreased synthesis of myelin lipids and a striking reduction in brain aspartate and N-acetylaspartate levels.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    27
  • GO References
    9
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    641
  • Tissues
    6
  • cDNA Data
    12
  • Literature Summary
    3
  • Comparison Matrix
    Gene Expression + Phenotype
    • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 78830 NCBI Gene Model | MGI Sequence Detail 93512 C57BL/6J ±  kb
    transcript NM_172436 RefSeq | MGI Sequence Detail 3168 C57BL/6  
    polypeptide Q8BH59 UniProt | EBI | MGI Sequence Detail 677 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 14
      cDNA 13
      Primer pair 1

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGI:2139062, MGI:2139433
    References
    more
    • Summaries
      All 53
      Developmental Gene Expression 3
      Diseases 1
      Gene Ontology 9
      Phenotypes 21
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:294280 Puertas-Frias G, et al., Mitochondrial movement in Aralar/Slc25a12/AGC1 deficient cortical neurons. Neurochem Int. 2019 Dec;131:104541
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    10/13/2020
    MGI 6.16     		The Jackson Laboratory