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Rhot1
Gene Detail
Symbol

Name
ID
Rhot1
ras homolog gene family, member T1
MGI:1926078
Synonyms
2210403N23Rik, Arht1, C430039G08Rik, FLJ11040, Miro1
Feature Type
protein coding gene
Genetic Map
Chromosome 11
47.62 cM, cytoband B5
Detailed Genetic Map ± 1 cM


Mapping data(4)
Sequence Map
Chr11:80209019-80267486 bp, + strand
From VEGA annotation of GRCm38

  58468 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:56803  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

Protein SuperFamily: mitochondrial Rho GTPase
Gene Tree: Rhot1

Human
homologs
Human Homolog RHOT1, ras homolog family member T1
NCBI Gene ID 55288
neXtProt AC  NX_Q8IXI2
Human Synonyms  ARHT1, MIRO1, MIRO-1
Human Chr (Location)  17q11.2; chr17:32142454-32253374 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(77) : Gene trapped(75) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Rhot1 interacts with 340 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
Expression
cDNA source data(27)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(27) cDNA(27)
Microarray probesets(6)
Other database
links
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000000219 VEGA Gene Model | MGI Sequence Detail 58468 C57BL/6J ±  kb
transcript OTTMUST00000000643 VEGA | MGI Sequence Detail 3297 Not Applicable 
polypeptide OTTMUSP00000000282 VEGA | MGI Sequence Detail 704 Not Applicable 

For the selected sequences
All sequences(113) RefSeq(21) UniProt(5)
Polymorphisms
SNPs within 2kb(176 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR018247 EF-Hand 1, calcium-binding site
InterPro IPR013566 EF hand associated, type-1
InterPro IPR013567 EF hand associated, type-2
InterPro IPR002048 EF-hand domain
InterPro IPR011992 EF-hand-like domain
InterPro IPR020860 MIRO
InterPro IPR013684 Mitochondrial Rho-like
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
InterPro IPR001806 Small GTPase superfamily
InterPro IPR021181 Small GTPase superfamily, mitochondrial rho type
InterPro IPR005225 Small GTP-binding protein domain
Protein Ontology PR:000013985 mitochondrial Rho GTPase 1
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(46)
Other
accession IDs
MGI:1891738, MGI:1924850, MGI:2144011, MGI:2144268

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory