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Ttc30a1 Gene Detail
Summary
  • Symbol
    Ttc30a1
  • Name
    tetratricopeptide repeat domain 30A1
  • Synonyms
    4930506L13Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926052
    NCBI Gene: 78802
Location & Maps
more
  • Sequence Map
    Chr2:75978247-75981967 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      3721 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 44.80 cM, cytoband D
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    TTC30A, tetratricopeptide repeat domain 30A
  • Vertebrate Orthologs
    5
  • Human Ortholog
    TTC30A, tetratricopeptide repeat domain 30A
    Orthology source: HomoloGene, HGNC
  • Synonyms
    IFT70A
  • Links
    NCBI Gene ID: 92104
    neXtProt AC: NX_Q86WT1

  • Chr Location
    2q31.2; chr2:177614298-177618966 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Targeted
    2
  • Genomic Mutations
    3 involving Ttc30a1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000015169 VEGA Gene Model | MGI Sequence Detail 3721 C57BL/6J ±  kb
transcript OTTMUST00000035968 VEGA | MGI Sequence Detail 3721 Not Applicable  
polypeptide OTTMUSP00000016154 VEGA | MGI Sequence Detail 664 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    40 from dbSNP Build 142
Protein
Information
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  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000016780 tetratricopeptide repeat protein 30A
  • InterPro Domains
    IPR011990 Tetratricopeptide-like helical domain
    IPR019734 Tetratricopeptide repeat
    IPR013026 Tetratricopeptide repeat-containing domain
Molecular
Reagents
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  • All nucleic 17
    cDNA 17

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Gene Ontology 4
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:203626 Howard PW, et al., Interaction of mouse TTC30/DYF-1 with multiple intraflagellar transport complex B proteins and KIF17. Exp Cell Res. 2013 Aug 15;319(14):2275-81

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
09/20/2016
MGI 6.05
The Jackson Laboratory