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4930480K15Rik Gene Detail
Summary
  • Symbol
    4930480K15Rik
  • Name
    RIKEN cDNA 4930480K15 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1926050
    NCBI Gene: 78800
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr17:90861169-90867102 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 60.34 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    45 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1926050
lncRNA gene Chr17:90861169-90867102 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015357
unclassified non-coding RNA gene Chr17:94456822-94462758 (+)
A/J MGP_AJ_G0015331
unclassified non-coding RNA gene Chr17:91383621-91389569 (+)
AKR/J MGP_AKRJ_G0015295
unclassified non-coding RNA gene Chr17:92895878-92901819 (+)
BALB/cJ MGP_BALBcJ_G0015295
unclassified non-coding RNA gene Chr17:91193574-91199524 (+)
C3H/HeJ MGP_C3HHeJ_G0015119
unclassified non-coding RNA gene Chr17:93824843-93830783 (+)
C57BL/6NJ MGP_C57BL6NJ_G0015749
unclassified non-coding RNA gene Chr17:97702033-97707966 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013490
unclassified non-coding RNA gene Chr17:86333822-86340214 (+)
CAST/EiJ MGP_CASTEiJ_G0014670
unclassified non-coding RNA gene Chr17:94728613-94734451 (+)
CBA/J MGP_CBAJ_G0015098
unclassified non-coding RNA gene Chr17:101779082-101785030 (+)
DBA/2J MGP_DBA2J_G0015193
unclassified non-coding RNA gene Chr17:89747149-89753045 (+)
FVB/NJ MGP_FVBNJ_G0015200
unclassified non-coding RNA gene Chr17:89289924-89295842 (+)
LP/J MGP_LPJ_G0015273
unclassified non-coding RNA gene Chr17:95223586-95229527 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015226
unclassified non-coding RNA gene Chr17:101649408-101655364 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0015788
unclassified non-coding RNA gene Chr17:93471639-93477523 (+)
PWK/PhJ MGP_PWKPhJ_G0014460
unclassified non-coding RNA gene Chr17:89473362-89479899 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014247
unclassified non-coding RNA gene Chr17:90248611-90254654 (+)
WSB/EiJ MGP_WSBEiJ_G0014777
unclassified non-coding RNA gene Chr17:94349930-94355909 (+)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 78800 NCBI Gene Model | MGI Sequence Detail 5934 C57BL/6J ±  kb
transcript NR_045463 RefSeq | MGI Sequence Detail 2199 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/22/2020
MGI 6.16
The Jackson Laboratory