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Galnt15
Gene Detail
Symbol

Name
ID
Galnt15
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15
MGI:1926004
Synonyms
4631401E18Rik, Galntl2
Feature Type
protein coding gene
Genetic Map
Chromosome 14
19.40 cM, cytoband B
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr14:32028989-32062197 bp, + strand
From VEGA annotation of GRCm38

  33209 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:14286  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog

Gene Tree: Galnt15

Human
homologs
Human Homolog GALNT15, polypeptide N-acetylgalactosaminyltransferase 15
NCBI Gene ID 117248
neXtProt AC  NX_Q8N3T1
Human Synonyms  GALNACT15, GALNT13, GALNT7, GALNTL2, PIH5
Human Chr (Location)  3p25.1; chr3:16174579-16244524 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from APF )
Interactions
Galnt15 interacts with 370 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process biological_process
Component Golgi apparatus, integral component of membrane, ...
Function carbohydrate binding, metal ion binding, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(21)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(21) cDNA(21)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000035518 (Evidence)
Ensembl Gene ModelENSMUSG00000021903 (Evidence)
Entrez Gene78754 (Evidence)
UniGene40681
DFCITC1598170, TC1603376, TC1605742, TC1662099
DoTSDT.40172096, DT.91359145
NIA Mouse Gene IndexU015469
EC2.4.1.41
Consensus CDS ProjectCCDS36859.1
International Mouse Knockout Project StatusGalnt15
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000035518 VEGA Gene Model | MGI Sequence Detail 33209 C57BL/6J ±  kb
transcript OTTMUST00000090963 VEGA | MGI Sequence Detail 6326 Not Applicable 
polypeptide OTTMUSP00000050038 VEGA | MGI Sequence Detail 638 Not Applicable 

For the selected sequences
All sequences(37) RefSeq(6) UniProt(3)
Polymorphisms
SNPs within 2kb(125 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001173 Glycosyl transferase, family 2
InterPro IPR000772 Ricin B lectin domain
Protein Ontology PR:000007831 polypeptide N-acetylgalactosaminyltransferase-like protein 2
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(33)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory