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C030006K11Rik
Gene Detail
Symbol

Name
ID
C030006K11Rik
RIKEN cDNA C030006K11 gene
MGI:1925941
Synonyms
1110033I13Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 15
36.28 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr15:76721466-76723845 bp, - strand
From Ensembl annotation of GRCm38

  2380 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:17079  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle

Gene Tree: C030006K11Rik

Human
homologs
Human Homolog C8orf82, chromosome 8 open reading frame 82
NCBI Gene ID 414919
neXtProt AC  NX_Q6P1X6
Human Chr (Location)  8q24; chr8:144526219-144529074 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(1) Radiation induced(1) Targeted(1)
Genomic Mutations involving C030006K11Rik (1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
C030006K11Rik interacts with 73 markers (Mir15a, Mir15b, Mir16-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component mitochondrion
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(43)
External Resources: Allen Institute   GEO  
Molecular
reagents
All nucleic(45) cDNA(45)
Microarray probesets(2)
Other database
links
Ensembl Gene ModelENSMUSG00000079002 (Evidence)
Entrez Gene223665 (Evidence)
UniGene291713
DFCITC1590745, TC1589985, TC1577836, TC1697501
Consensus CDS ProjectCCDS27591.1
International Mouse Knockout Project StatusC030006K11Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000079002 Ensembl Gene Model | MGI Sequence Detail 2380 C57BL/6J ±  kb
transcript ENSMUST00000036247 Ensembl | MGI Sequence Detail 1758 Not Applicable 
polypeptide ENSMUSP00000039910 Ensembl | MGI Sequence Detail 218 Not Applicable 

For the selected sequences
All sequences(24) RefSeq(4)
Polymorphisms
SNPs within 2kb(11 from dbSNP Build 137)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(20)
Other
accession IDs
MGI:1923568

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory