About   Help   FAQ
Eif3j1
Gene Detail
Symbol

Name
ID
Eif3j1
eukaryotic translation initiation factor 3, subunit J1
MGI:1925905
Synonyms
1810016I04Rik, 2700079K05Rik, eIF3-alpha, Eif3j, eIF3-p35, Eif3s1
Feature Type
protein coding gene
Genetic Map
Chromosome 2
60.49 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr2:122028546-122056598 bp, + strand
From VEGA annotation of GRCm38

  28053 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:37845  Vertebrate Homology Class
1 human; 2 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: EIF3J
Gene Tree: Eif3j1

Human
homologs
EIF3J, eukaryotic translation initiation factor 3, subunit J
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 8669
neXtProt AC: NX_O75822

Human Synonyms: eIF3-alpha, eIF3-p35, EIF3S1

Human Chr (Location): 15q21.1; chr15:44537068-44562803 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(10) : Gene trapped(9) Targeted(1)
Incidental mutations (data from APF )
Interactions
Eif3j1 interacts with 484 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
Expression
cDNA source data(15)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase eif3j ; ZFIN eif3jb    NEW 
Molecular
reagents
All nucleic(15) cDNA(15)
Microarray probesets(5)
Other database
links
VEGA Gene Model OTTMUSG00000015531 (Evidence)
Ensembl Gene Model ENSMUSG00000027236 (Evidence)
Entrez Gene 78655 (Evidence)
Consensus CDS Project CCDS38219.1
International Mouse Phenotyping Consortium Status Eif3j1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000015531 VEGA Gene Model | MGI Sequence Detail 28053 C57BL/6J ±  kb
transcript OTTMUST00000036883 VEGA | MGI Sequence Detail 5413 Not Applicable 
polypeptide OTTMUSP00000016547 VEGA | MGI Sequence Detail 261 Not Applicable 

For the selected sequences
All sequences(31) RefSeq(4)
Polymorphisms
SNPs within 2kb(176 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000035847 eukaryotic translation initiation factor 3 subunit J-A
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:175974 Xing XB, et al., The discovery of novel protein-coding features in mouse genome based on mass spectrometry data. Genomics. 2011 Aug 4;
All references(29)
Other
accession IDs
MGI:1925620, MGI:2138762, MGI:2138769, MGI:2139474

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/25/2015
MGI 6.0
The Jackson Laboratory