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1700116B05Rik Gene Detail
Summary
  • Symbol
    1700116B05Rik
  • Name
    RIKEN cDNA 1700116B05 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925889
    NCBI Gene: 78639
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:50783409-50784091 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 31.50 cM, cytoband B5
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    36 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925889
lncRNA gene Chr16:50783409-50784091 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005668
lincRNA gene Chr16:49717811-49718493 (+)
A/J MGP_AJ_G0005655
lincRNA gene Chr16:47552745-47553427 (+)
AKR/J MGP_AKRJ_G0005634
lincRNA gene Chr16:49132040-49132722 (+)
BALB/cJ MGP_BALBcJ_G0005635
lincRNA gene Chr16:47618442-47619124 (+)
C3H/HeJ MGP_C3HHeJ_G0005582
lincRNA gene Chr16:49198750-49199433 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005793
lincRNA gene Chr16:50990748-50998449 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005151
lincRNA gene Chr16:47586229-47586899 (+)
CAST/EiJ MGP_CASTEiJ_G0005526
lincRNA gene Chr16:49550027-49550700 (+)
CBA/J MGP_CBAJ_G0005572
lincRNA gene Chr16:53030573-53032376 (+)
DBA/2J MGP_DBA2J_G0005587
lincRNA gene Chr16:47271957-47272772 (+)
FVB/NJ MGP_FVBNJ_G0005614
lincRNA gene Chr16:47139840-47140522 (+)
LP/J MGP_LPJ_G0005671
lincRNA gene Chr16:49506557-49508925 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005599
lincRNA gene Chr16:52739254-52740687 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005793
lincRNA gene Chr16:49184958-49187560 (+)
PWK/PhJ MGP_PWKPhJ_G0005473
lincRNA gene Chr16:47625038-47625722 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005392
lincRNA gene Chr16:49006759-49007426 (+)
WSB/EiJ MGP_WSBEiJ_G0005576
lincRNA gene Chr16:49178887-49180625 (+)



Homology
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Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 78639 NCBI Gene Model | MGI Sequence Detail 683 C57BL/6J ±  kb
transcript NR_131005 RefSeq | MGI Sequence Detail 428 C57BL/6  
polypeptide Q9CU03 UniProt | EBI | MGI Sequence Detail 115 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 12
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory