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1700104B16Rik Gene Detail
Summary
  • Symbol
    1700104B16Rik
  • Name
    RIKEN cDNA 1700104B16 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925886
    NCBI Gene: 100504592
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:33730534-33731819 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 20.79 cM, cytoband A3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    63 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925886
lncRNA gene Chr8:33730534-33731819 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007315
lincRNA gene Chr8:32188805-32190083 (-)
A/J MGP_AJ_G0007313
lincRNA gene Chr8:30960001-30961279 (-)
AKR/J MGP_AKRJ_G0007284
lincRNA gene Chr8:31926691-31927982 (-)
BALB/cJ MGP_BALBcJ_G0007291
lincRNA gene Chr8:31081363-31082641 (-)
C3H/HeJ MGP_C3HHeJ_G0007234
lincRNA gene Chr8:32247490-32252503 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007461
lincRNA gene Chr8:33429718-33431003 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006659
lincRNA gene Chr8:27963050-27964340 (-)
CAST/EiJ MGP_CASTEiJ_G0007137
lincRNA gene Chr8:31691722-31692999 (-)
CBA/J MGP_CBAJ_G0007217
lincRNA gene Chr8:34735515-34736831 (-)
DBA/2J MGP_DBA2J_G0007239
lincRNA gene Chr8:30938302-30939625 (-)
FVB/NJ MGP_FVBNJ_G0007260
lincRNA gene Chr8:30602011-30603296 (-)
LP/J MGP_LPJ_G0007320
lincRNA gene Chr8:32154204-32156340 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007237
lincRNA gene Chr8:34270119-34271394 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007463
lincRNA gene Chr8:32017101-32018386 (-)
PWK/PhJ MGP_PWKPhJ_G0007078
lincRNA gene Chr8:30454726-30456035 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006986
lincRNA gene Chr8:31282556-31283843 (-)
WSB/EiJ MGP_WSBEiJ_G0007196
lincRNA gene Chr8:32145682-32150387 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000049476 Ensembl Gene Model | MGI Sequence Detail 1286 C57BL/6J ±  kb
transcript ENSMUST00000187948 Ensembl | MGI Sequence Detail 722 Not Applicable  
polypeptide Q9D2S2 UniProt | EBI | MGI Sequence Detail 107 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 15
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory