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9530036M11Rik Gene Detail
Summary
  • Symbol
    9530036M11Rik
  • Name
    RIKEN cDNA 9530036M11 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925866
    NCBI Gene: 78616
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:54146887-54150937 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 26.77 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    118 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925866
lncRNA gene Chr6:54139523-54151442 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004275
antisense lncRNA gene Chr6:53486833-53490877 (-)
A/J MGP_AJ_G0004253
antisense lncRNA gene Chr6:51005204-51009248 (-)
AKR/J MGP_AKRJ_G0004234
antisense lncRNA gene Chr6:52737705-52741749 (-)
BALB/cJ MGP_BALBcJ_G0004240
antisense lncRNA gene Chr6:51357172-51361216 (-)
C3H/HeJ MGP_C3HHeJ_G0004188
antisense lncRNA gene Chr6:52759212-52763256 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004389
antisense lncRNA gene Chr6:54673869-54677919 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003862
antisense lncRNA gene Chr6:48622724-48626746 (-)
CAST/EiJ MGP_CASTEiJ_G0004150
antisense lncRNA gene Chr6:52600102-52604143 (-)
CBA/J MGP_CBAJ_G0004182
antisense lncRNA gene Chr6:56924394-56928438 (-)
DBA/2J MGP_DBA2J_G0004198
antisense lncRNA gene Chr6:50910234-50914278 (-)
FVB/NJ MGP_FVBNJ_G0004214
antisense lncRNA gene Chr6:50497516-50501560 (-)
LP/J MGP_LPJ_G0004276
antisense lncRNA gene Chr6:53433874-53437918 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004204
antisense lncRNA gene Chr6:59472349-59476393 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004386
antisense lncRNA gene Chr6:52691764-52695813 (-)
PWK/PhJ MGP_PWKPhJ_G0004103
antisense lncRNA gene Chr6:50555949-50559992 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004047
antisense lncRNA gene Chr6:52059722-52063755 (-)
WSB/EiJ MGP_WSBEiJ_G0004186
antisense lncRNA gene Chr6:52709980-52714021 (-)



Homology
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000087670 Ensembl Gene Model | MGI Sequence Detail 4051 C57BL/6J ±  kb
transcript ENSMUST00000138767 Ensembl | MGI Sequence Detail 1996 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory