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Mir142hg Gene Detail
Summary
  • Symbol
    Mir142hg
  • Name
    Mir142 host gene (non-protein coding)
  • Synonyms
    A430104N18Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925841
    NCBI Gene: 78591
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:87755577-87757270 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 52.21 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    44 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925841
lncRNA gene Chr11:87755577-87757270 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005275
lincRNA gene Chr11:89387584-89389285 (+)
A/J MGP_AJ_G0005260
lincRNA gene Chr11:85941116-85942806 (+)
AKR/J MGP_AKRJ_G0005237
lincRNA gene Chr11:88515835-88517505 (+)
BALB/cJ MGP_BALBcJ_G0005240
lincRNA gene Chr11:86342268-86343966 (+)
C3H/HeJ MGP_C3HHeJ_G0005189
lincRNA gene Chr11:88554401-88556100 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005392
lincRNA gene Chr11:92103513-92105197 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004785
lincRNA gene Chr11:82969106-82970765 (+)
CAST/EiJ MGP_CASTEiJ_G0005136
lincRNA gene Chr11:89247588-89249274 (+)
CBA/J MGP_CBAJ_G0005179
lincRNA gene Chr11:95962445-95970508 (+)
DBA/2J MGP_DBA2J_G0005196
lincRNA gene Chr11:85494576-85496988 (+)
FVB/NJ MGP_FVBNJ_G0005221
lincRNA gene Chr11:85001342-85003032 (+)
LP/J MGP_LPJ_G0005277
lincRNA gene Chr11:89879259-89880962 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005204
lincRNA gene Chr11:96012495-96014187 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005396
lincRNA gene Chr11:88753189-88754890 (+)
PWK/PhJ MGP_PWKPhJ_G0005085
lincRNA gene Chr11:86344490-86346172 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005007
lincRNA gene Chr11:88310596-88313320 (+)
WSB/EiJ MGP_WSBEiJ_G0005184
lincRNA gene Chr11:88644180-88645868 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    10 phenotypes from 1 allele in 1 genetic background
    15 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for an allele that abolishes expression of Mir142 disrupts dendritic cell homeostasis.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Sequences &
    Gene Models
    less
    • All Sequences
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000084796 Ensembl Gene Model | MGI Sequence Detail 1694 C57BL/6J ±  kb
    transcript ENSMUST00000123700 Ensembl | MGI Sequence Detail 269 Not Applicable  
    For the selected sequence
    Molecular
    Reagents
    less
    • All nucleic 6
      cDNA 5
      Primer pair 1

      Microarray probesets 2
    Other
    Accession IDs
    less
    MGI:2144590
    References
    more
    • Summaries
      All 28
      Developmental Gene Expression 1
      Gene Ontology 1
      Phenotypes 15
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:290284 Shrestha A, et al., A critical role for miR-142 in alveolar epithelial lineage formation in mouse lung development. Cell Mol Life Sci. 2019 Jul;76(14):2817-2832

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    last database update
    09/22/2020
    MGI 6.16
    The Jackson Laboratory