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Ccdc190 Gene Detail
Summary
  • Symbol
    Ccdc190
  • Name
    coiled-coil domain containing 190
  • Synonyms
    1700084C01Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925715
    NCBI Gene: 78465
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:169928648-169934653 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 76.84 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    86 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925715
protein coding gene Chr1:169928600-169935318 (+)
129S1/SvImJ MGP_129S1SvImJ_G0016722
protein coding gene Chr1:175615264-175622832 (+)
A/J MGP_AJ_G0016702
protein coding gene Chr1:168431948-168437831 (+)
AKR/J MGP_AKRJ_G0016668
protein coding gene Chr1:173511294-173517262 (+)
BALB/cJ MGP_BALBcJ_G0016663
protein coding gene Chr1:168925526-168932721 (+)
C3H/HeJ MGP_C3HHeJ_G0016487
protein coding gene Chr1:173760344-173767805 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017124
protein coding gene Chr1:181426045-181435027 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014833
protein coding gene Chr1:160199314-160205642 (+)
CAST/EiJ MGP_CASTEiJ_G0016067
protein coding gene Chr1:173378825-173386246 (+)
CBA/J MGP_CBAJ_G0016462
protein coding gene Chr1:187884219-187890645 (+)
DBA/2J MGP_DBA2J_G0016568
protein coding gene Chr1:167308038-167314095 (+)
FVB/NJ MGP_FVBNJ_G0016566
protein coding gene Chr1:165683771-165689658 (+)
LP/J MGP_LPJ_G0016639
protein coding gene Chr1:176672395-176679838 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016591
protein coding gene Chr1:195218605-195224468 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017161
protein coding gene Chr1:173393344-173399290 (+)
PWK/PhJ MGP_PWKPhJ_G0015853
protein coding gene Chr1:166531903-166538236 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015639
protein coding gene Chr1:172159851-172167996 (+)
WSB/EiJ MGP_WSBEiJ_G0016129
protein coding gene Chr1:173512768-173518492 (+)



Homology
more
  • Human Ortholog
    CCDC190, coiled-coil domain containing 190
  • Vertebrate Orthologs
    6
  • Human Ortholog
    CCDC190, coiled-coil domain containing 190
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C1orf110
  • Links
    NCBI Gene ID: 339512
    neXtProt AC: NX_Q86UF4
    UniProt: Q86UF4

  • Chr Location
    1q23.3; chr1:162851291-162868918 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000070532 Ensembl Gene Model | MGI Sequence Detail 6006 C57BL/6J ±  kb
transcript ENSMUST00000175731 Ensembl | MGI Sequence Detail 1128 Not Applicable  
polypeptide ENSMUSP00000135819 Ensembl | MGI Sequence Detail 289 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR031525 Coiled-coil domain-containing protein 190
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 15
    Developmental Gene Expression 1
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:154739 Quina LA, et al., Brn3a and Nurr1 mediate a gene regulatory pathway for habenula development. J Neurosci. 2009 Nov 11;29(45):14309-22

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/14/2019
MGI 6.14
The Jackson Laboratory