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Ccdc190 Gene Detail
Summary
  • Symbol
    Ccdc190
  • Name
    coiled-coil domain containing 190
  • Synonyms
    1700084C01Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925715
    NCBI Gene: 78465
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:169928648-169934653 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 76.84 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    86 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925715
protein coding gene Chr1:169928599-169935318 (+)
129S1/SvImJ MGP_129S1SvImJ_G0016722
protein coding gene Chr1:175615264-175622832 (+)
A/J MGP_AJ_G0016702
protein coding gene Chr1:168431948-168437831 (+)
AKR/J MGP_AKRJ_G0016668
protein coding gene Chr1:173511294-173517262 (+)
BALB/cJ MGP_BALBcJ_G0016663
protein coding gene Chr1:168925526-168932721 (+)
C3H/HeJ MGP_C3HHeJ_G0016487
protein coding gene Chr1:173760344-173767805 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017124
protein coding gene Chr1:181426045-181435027 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014833
protein coding gene Chr1:160199314-160205642 (+)
CAST/EiJ MGP_CASTEiJ_G0016067
protein coding gene Chr1:173378825-173386246 (+)
CBA/J MGP_CBAJ_G0016462
protein coding gene Chr1:187884219-187890645 (+)
DBA/2J MGP_DBA2J_G0016568
protein coding gene Chr1:167308038-167314095 (+)
FVB/NJ MGP_FVBNJ_G0016566
protein coding gene Chr1:165683771-165689658 (+)
LP/J MGP_LPJ_G0016639
protein coding gene Chr1:176672395-176679838 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016591
protein coding gene Chr1:195218605-195224468 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017161
protein coding gene Chr1:173393344-173399290 (+)
PWK/PhJ MGP_PWKPhJ_G0015853
protein coding gene Chr1:166531903-166538236 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015639
protein coding gene Chr1:172159851-172167996 (+)
WSB/EiJ MGP_WSBEiJ_G0016129
protein coding gene Chr1:173512768-173518492 (+)



Homology
more
  • Human Ortholog
    CCDC190, coiled-coil domain containing 190
  • Vertebrate Orthologs
    6
  • Human Ortholog
    CCDC190, coiled-coil domain containing 190
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C1orf110
  • Links
    NCBI Gene ID: 339512
    neXtProt AC: NX_Q86UF4
    UniProt: Q86UF4

  • Chr Location
    1q23.3; chr1:162851291-162868918 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000070532 Ensembl Gene Model | MGI Sequence Detail 6006 C57BL/6J ±  kb
transcript ENSMUST00000175731 Ensembl | MGI Sequence Detail 1128 Not Applicable  
polypeptide ENSMUSP00000135819 Ensembl | MGI Sequence Detail 289 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR031525 Coiled-coil domain-containing protein 190
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 15
    Developmental Gene Expression 1
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:154739 Quina LA, et al., Brn3a and Nurr1 mediate a gene regulatory pathway for habenula development. J Neurosci. 2009 Nov 11;29(45):14309-22

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/03/2020
MGI 6.15
The Jackson Laboratory