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9530046B11Rik Gene Detail
Summary
  • Symbol
    9530046B11Rik
  • Name
    RIKEN cDNA 9530046B11 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925671
    NCBI Gene: 78421
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr5:117115218-117118723 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 56.88 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    12 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925671
lncRNA gene Chr5:117115218-117118723 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004157
antisense lncRNA gene Chr5:120172738-120176240 (+)
A/J MGP_AJ_G0004136
antisense lncRNA gene Chr5:115304913-115308369 (+)
AKR/J MGP_AKRJ_G0004117
antisense lncRNA gene Chr5:119021600-119027489 (+)
BALB/cJ MGP_BALBcJ_G0004122
antisense lncRNA gene Chr5:116721465-116725396 (+)
C3H/HeJ MGP_C3HHeJ_G0004071
antisense lncRNA gene Chr5:119540911-119544398 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004271
antisense lncRNA gene Chr5:124745562-124749033 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003747
antisense lncRNA gene Chr5:110067200-110069227 (+)
CAST/EiJ MGP_CASTEiJ_G0004032
antisense lncRNA gene Chr5:118545123-118548625 (+)
CBA/J MGP_CBAJ_G0004065
antisense lncRNA gene Chr5:129563975-129567462 (+)
DBA/2J MGP_DBA2J_G0004080
antisense lncRNA gene Chr5:115401335-115404820 (+)
FVB/NJ MGP_FVBNJ_G0004096
antisense lncRNA gene Chr5:114253210-114256693 (+)
LP/J MGP_LPJ_G0004158
antisense lncRNA gene Chr5:120682976-120688135 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004086
antisense lncRNA gene Chr5:133807564-133811049 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004268
antisense lncRNA gene Chr5:118540519-118545347 (+)
PWK/PhJ MGP_PWKPhJ_G0003986
antisense lncRNA gene Chr5:114084508-114088004 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003929
antisense lncRNA gene Chr5:116110226-116113711 (+)
WSB/EiJ MGP_WSBEiJ_G0004069
antisense lncRNA gene Chr5:119121955-119125438 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 9530046B11Rik
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086047 Ensembl Gene Model | MGI Sequence Detail 3506 C57BL/6J ±  kb
transcript ENSMUST00000149413 Ensembl | MGI Sequence Detail 1157 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 12
    Phenotypes 5
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory