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Pgm5 Gene Detail
Summary
  • Symbol
    Pgm5
  • Name
    phosphoglucomutase 5
  • Synonyms
    9530034F03Rik, aciculin
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925668
    NCBI Gene: 226041
  • Gene Overview
    MyGene.info: PGM5
  • Alliance
  • Transcription Start Sites
    9 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:24683016-24861855 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 19.78 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2669 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925668
protein coding gene Chr19:24678261-24861855 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024997
protein coding gene Chr19:22937545-23122307 (-)
A/J MGP_AJ_G0024974
protein coding gene Chr19:21669473-21844059 (-)
AKR/J MGP_AKRJ_G0024942
protein coding gene Chr19:22484812-22659900 (-)
BALB/cJ MGP_BALBcJ_G0024973
protein coding gene Chr19:21727453-21903160 (-)
C3H/HeJ MGP_C3HHeJ_G0024729
protein coding gene Chr19:22454353-22631780 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025414
protein coding gene Chr19:23645167-23832432 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022833
protein coding gene Chr19:21839132-22009760 (-)
CAST/EiJ MGP_CASTEiJ_G0024199
protein coding gene Chr19:22198698-22383250 (-)
CBA/J MGP_CBAJ_G0024707
protein coding gene Chr19:24638002-24813203 (-)
DBA/2J MGP_DBA2J_G0024839
protein coding gene Chr19:21678553-21848537 (-)
FVB/NJ MGP_FVBNJ_G0024801
protein coding gene Chr19:21553663-21726235 (-)
LP/J MGP_LPJ_G0024924
protein coding gene Chr19:22883869-23064338 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024828
protein coding gene Chr19:24698824-24894312 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025469
protein coding gene Chr19:22509554-22687072 (-)
PWK/PhJ MGP_PWKPhJ_G0023947
protein coding gene Chr19:21289369-21461636 (-)
SPRET/EiJ MGP_SPRETEiJ_G0023752
protein coding gene Chr19:21750216-21940539 (-)
WSB/EiJ MGP_WSBEiJ_G0024266
protein coding gene Chr19:22537789-22712620 (-)



Homology
more
  • Human Ortholog
    PGM5, phosphoglucomutase 5
  • Vertebrate Orthologs
    9
  • Human Ortholog
    PGM5, phosphoglucomutase 5
    Orthology source: HomoloGene, HGNC
  • Synonyms
    PGMRP
  • Links
    NCBI Gene ID: 5239
    neXtProt AC: NX_Q15124
    UniProt: Q15124

  • Chr Location
    9q21.11; chr9:68356438-68531061 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000041731 Ensembl Gene Model | MGI Sequence Detail 178840 C57BL/6J ±  kb
transcript ENSMUST00000047666 Ensembl | MGI Sequence Detail 3239 Not Applicable  
polypeptide ENSMUSP00000036025 Ensembl | MGI Sequence Detail 567 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000012618 phosphoglucomutase-like protein 5
  • InterPro Domains
    IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I
    IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II
    IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III
    IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III
    IPR016066 Alpha-D-phosphohexomutase, conserved site
    IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily
    IPR005841 Alpha-D-phosphohexomutase superfamily
Molecular
Reagents
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  • All nucleic 10
    Genomic 1
    cDNA 8
    Primer pair 1

    Microarray probesets 4
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Gene Ontology 8
    Phenotypes 2
  • Earliest
    J:125409 Belkin AM, et al., Association of aciculin with dystrophin and utrophin. J Biol Chem. 1995 Mar 17;270(11):6328-37
  • Latest
    J:259848 Chal J, et al., Recapitulating early development of mouse musculoskeletal precursors of the paraxial mesoderm in vitro. Development. 2018 Mar 19;145(6)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory