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Rnase6
Gene Detail
 Symbol
Name
ID
Rnase6
ribonuclease, RNase A family, 6
MGI:1925666
Synonyms 9530043P15Rik
Feature Type protein coding gene
Genetic Map
Chromosome 14
26.39 cM, cytoband C1
Detailed Genetic Map ± 1 cM


Mapping data(4)
Sequence Map
Chr14:51129068-51131122 bp, + strand
From NCBI annotation of GRCm38

  2055 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:4102  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle

Protein SuperFamily: pyrimidine-specific ribonuclease/angiogenin
Gene Tree: Rnase6

Human
homologs
Human Homolog RNASE6, ribonuclease, RNase A family, k6
NCBI Gene ID 6039
neXtProt AC  NX_Q93091
Human Synonyms  RAD1, RNasek6, RNS6
Human Chr (Location)  14q11.2; chr14:20781051-20782467 (+)  GRCh38
Interactions
Rnase6 interacts with 83 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process biological_process
Component extracellular vesicular exosome
Function endonuclease activity, hydrolase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)   
Theiler Stages: 22
Assay TypeResults
RNA in situ 94
cDNA source data(7)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(8) cDNA(7) Primer pair(1)
Microarray probesets(2)
Other database
links
Ensembl Gene ModelENSMUSG00000021880 (Evidence)
Entrez Gene78416 (Evidence)
DFCITC1583671, TC1661650, TC1699467
DoTSDT.531120
NIA Mouse Gene IndexU015582
EC3.1.27.-
Consensus CDS ProjectCCDS27037.1
International Mouse Knockout Project StatusRnase6
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 78416 NCBI Gene Model | MGI Sequence Detail 2055 C57BL/6J ±  kb
transcript NM_030098 RefSeq | MGI Sequence Detail 1072 C57BL/6 
polypeptide Q9D244 UniProt | EBI | MGI Sequence Detail 153 Not Applicable 

For the selected sequences
All sequences(24) RefSeq(4) UniProt(2)
Polymorphisms SNPs within 2kb(40 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001427 Ribonuclease A
InterPro IPR023411 Ribonuclease A, active site
InterPro IPR023412 Ribonuclease A-domain
Protein Ontology PR:000014049 ribonuclease K6
Graphical View of Protein Domain Structure
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
All references(28)
Other
accession IDs
MGI:2145852

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory