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Fnbp1l
Gene Detail
Symbol

Name
ID
Fnbp1l
formin binding protein 1-like
MGI:1925642
Synonyms
2610318I01Rik, TOCA1
Feature Type
protein coding gene
Genetic Map
Chromosome 3
53.63 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr3:122538719-122619667 bp, - strand
From VEGA annotation of GRCm38

  80949 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:134636  Vertebrate Homology Class
1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

Gene Tree: Fnbp1l

Mutations,
alleles, and
phenotypes
All mutations/alleles(19) : Gene trapped(15) Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Fnbp1l interacts with 389 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process autophagy, cilium assembly, ...
Component cytoplasm, cytoplasmic vesicle, ...
Function lipid binding
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (117)    Tissues (12)    Images (23)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 117
cDNA source data(9)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(9) cDNA(9)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000034289 (Evidence)
Ensembl Gene ModelENSMUSG00000039735 (Evidence)
Entrez Gene214459 (Evidence)
DFCITC1610535, TC1636575, TC1715392
DoTSDT.101365298, DT.91585299, DT.97373613
NIA Mouse Gene IndexU024600
Consensus CDS ProjectCCDS17811.2, CCDS51062.1
International Mouse Knockout Project StatusFnbp1l
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000034289 VEGA Gene Model | MGI Sequence Detail 80949 C57BL/6J ±  kb
transcript OTTMUST00000087184 VEGA | MGI Sequence Detail 1830 Not Applicable 
polypeptide OTTMUSP00000047293 VEGA | MGI Sequence Detail 609 Not Applicable 

For the selected sequences
All sequences(37) RefSeq(4) UniProt(3)
Polymorphisms
SNPs within 2kb(917 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001060 FCH domain
InterPro IPR001452 Src homology-3 domain
Protein Ontology PR:000007585 formin-binding protein 1-like
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:205051 Miller JA, et al., Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates. Development. 2013 Nov;140(22):4633-44
All references(40)
Other
accession IDs
MGI:2139999

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory