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Lce6a Gene Detail
Summary
  • Symbol
    Lce6a
  • Name
    late cornified envelope 6A
  • Synonyms
    2210420J11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925632
    NCBI Gene: 78382
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:92527388-92528967 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 40.14 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    34 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925632
 protein coding gene Chr3:92512128-92528975 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027505
 protein coding gene Chr3:93072193-93073772 (-)
A/J MGP_AJ_G0027472
 protein coding gene Chr3:90146001-90147580 (-)
AKR/J MGP_AKRJ_G0027437
 protein coding gene Chr3:92260558-92262137 (-)
BALB/cJ MGP_BALBcJ_G0027480
 protein coding gene Chr3:89959148-89960717 (-)
C3H/HeJ MGP_C3HHeJ_G0027220
 protein coding gene Chr3:92478052-92479631 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027924
 protein coding gene Chr3:96620595-96622174 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025273
 protein coding gene Chr3:86774619-86776199 (-)
CAST/EiJ MGP_CASTEiJ_G0026667
 protein coding gene Chr3:91897939-91899511 (-)
CBA/J MGP_CBAJ_G0027194
 protein coding gene Chr3:99942384-99943963 (-)
DBA/2J MGP_DBA2J_G0027332
 protein coding gene Chr3:89466803-89468372 (-)
FVB/NJ MGP_FVBNJ_G0027300
 protein coding gene Chr3:87636964-87638543 (-)
LP/J MGP_LPJ_G0027440
 protein coding gene Chr3:94291997-94293576 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027325
 protein coding gene Chr3:106214953-106216507 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027983
 protein coding gene Chr3:91993739-91995308 (-)
PWK/PhJ MGP_PWKPhJ_G0026400
 protein coding gene Chr3:89350756-89352346 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026219
 protein coding gene Chr3:90323636-90325202 (-)
WSB/EiJ MGP_WSBEiJ_G0026750
 protein coding gene Chr3:92371524-92373098 (-)



Homology
more
  • Human Ortholog
    LCE6A, late cornified envelope 6A
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LCE6A, late cornified envelope 6A
  • Synonyms
    C1orf44
  • Links
    NCBI Gene ID: 448835
    neXtProt AC: NX_A0A183
    UniProt: A0A183

  • Chr Location
    1q21.3; chr1:152842856-152843983 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086848 Ensembl Gene Model | MGI Sequence Detail 1580 C57BL/6J ±  kb
transcript ENSMUST00000138403 Ensembl | MGI Sequence Detail 795 Not Applicable  
polypeptide ENSMUSP00000114595 Ensembl | MGI Sequence Detail 81 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR031716 Late cornified envelope protein 6A
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Diseases 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory