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Snrnp25 Gene Detail
Summary
  • Symbol
    Snrnp25
  • Name
    small nuclear ribonucleoprotein 25 (U11/U12)
  • Synonyms
    3300001G02Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925622
    NCBI Gene: 78372
Location & Maps
more
  • Sequence Map
    Chr11:32205415-32208984 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      3570 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 18.82 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SNRNP25, small nuclear ribonucleoprotein U11/U12 subunit 25
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SNRNP25, small nuclear ribonucleoprotein U11/U12 subunit 25
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C16orf33
  • Links
    NCBI Gene ID: 79622
    neXtProt AC: NX_Q9BV90

  • Chr Location
    16p13.3; chr16:53829-57669 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Targeted
    3
  • Genomic Mutations
    1 involving Snrnp25
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000005369 VEGA Gene Model | MGI Sequence Detail 3570 C57BL/6J ±  kb
transcript OTTMUST00000011976 VEGA | MGI Sequence Detail 821 Not Applicable  
polypeptide OTTMUSP00000005540 VEGA | MGI Sequence Detail 123 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    54 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000015333 U11/U12 small nuclear ribonucleoprotein 25 kDa protein
  • PDB
  • InterPro Domains
    IPR029071 Ubiquitin-related domain
Molecular
Reagents
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  • All nucleic 43
    cDNA 42
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
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MGI:2144360
References
more
  • Summaries
    All 25
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:137212 Pessa HK, et al., Minor spliceosome components are predominantly localized in the nucleus. Proc Natl Acad Sci U S A. 2008 Jun 24;105(25):8655-60

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/23/2016
MGI 6.05
The Jackson Laboratory