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2500002B13Rik Gene Detail
Summary
  • Symbol
    2500002B13Rik
  • Name
    RIKEN cDNA 2500002B13 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925603
    NCBI Gene: 78353
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:57488054-57508877 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 29.86 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    55 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925603
lncRNA gene Chr8:57487963-57510262 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007328
lincRNA gene Chr8:57216745-57242562 (+)
A/J MGP_AJ_G0007326
lincRNA gene Chr8:54801989-54825315 (+)
AKR/J MGP_AKRJ_G0007297
lincRNA gene Chr8:56432178-56452716 (+)
BALB/cJ MGP_BALBcJ_G0007304
lincRNA gene Chr8:55125083-55147048 (+)
C3H/HeJ MGP_C3HHeJ_G0007247
lincRNA gene Chr8:57086451-57108274 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007474
lincRNA gene Chr8:59420326-59443862 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006672
lincRNA gene Chr8:50353652-50376716 (+)
CAST/EiJ MGP_CASTEiJ_G0007149
lincRNA gene Chr8:56476392-56497202 (+)
CBA/J MGP_CBAJ_G0007230
lincRNA gene Chr8:61536188-61560012 (+)
DBA/2J MGP_DBA2J_G0007252
lincRNA gene Chr8:54610621-54631990 (+)
FVB/NJ MGP_FVBNJ_G0007273
lincRNA gene Chr8:53968808-53990014 (+)
LP/J MGP_LPJ_G0007333
lincRNA gene Chr8:57225229-57248780 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007250
lincRNA gene Chr8:63148855-63172077 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007476
lincRNA gene Chr8:56665743-56691351 (+)
PWK/PhJ MGP_PWKPhJ_G0007091
lincRNA gene Chr8:53925223-53945879 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006999
lincRNA gene Chr8:55533590-55567143 (+)
WSB/EiJ MGP_WSBEiJ_G0007209
lincRNA gene Chr8:56916492-56938439 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Genomic Mutations
    1 involving 2500002B13Rik
  • Find Mice (IMSR)
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000096917 Ensembl Gene Model | MGI Sequence Detail 20824 C57BL/6J ±  kb
transcript ENSMUST00000180690 Ensembl | MGI Sequence Detail 2618 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Phenotypes 6
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-Le-Grand). 1999 Jul;45(5):737-50
  • Latest
    J:255082 Kurogi S, et al., Development of an efficient screening system to identify novel bone metabolism-related genes using the exchangeable gene trap mutagenesis mouse models. Sci Rep. 2017 Jan 20;7:40692

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/05/2019
MGI 6.14
The Jackson Laboratory