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2500002B13Rik Gene Detail
Summary
  • Symbol
    2500002B13Rik
  • Name
    RIKEN cDNA 2500002B13 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925603
    NCBI Gene: 78353
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:57941088-57961911 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 29.86 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    53 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925603
lncRNA gene Chr8:57940997-57963296 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007328
lincRNA gene Chr8:57216745-57242562 (+)
A/J MGP_AJ_G0007326
lincRNA gene Chr8:54801989-54825315 (+)
AKR/J MGP_AKRJ_G0007297
lincRNA gene Chr8:56432178-56452716 (+)
BALB/cJ MGP_BALBcJ_G0007304
lincRNA gene Chr8:55125083-55147048 (+)
C3H/HeJ MGP_C3HHeJ_G0007247
lincRNA gene Chr8:57086451-57108274 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007474
lincRNA gene Chr8:59420326-59443862 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006672
lincRNA gene Chr8:50353652-50376716 (+)
CAST/EiJ MGP_CASTEiJ_G0007149
lincRNA gene Chr8:56476392-56497202 (+)
CBA/J MGP_CBAJ_G0007230
lincRNA gene Chr8:61536188-61560012 (+)
DBA/2J MGP_DBA2J_G0007252
lincRNA gene Chr8:54610621-54631990 (+)
FVB/NJ MGP_FVBNJ_G0007273
lincRNA gene Chr8:53968808-53990014 (+)
LP/J MGP_LPJ_G0007333
lincRNA gene Chr8:57225229-57248780 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007250
lincRNA gene Chr8:63148855-63172077 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007476
lincRNA gene Chr8:56665743-56691351 (+)
PWK/PhJ MGP_PWKPhJ_G0007091
lincRNA gene Chr8:53925223-53945879 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006999
lincRNA gene Chr8:55533590-55567143 (+)
WSB/EiJ MGP_WSBEiJ_G0007209
lincRNA gene Chr8:56916492-56938439 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Genomic Mutations
    1 involving 2500002B13Rik
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000096917 Ensembl Gene Model | MGI Sequence Detail 20824 C57BL/6J ±  kb
transcript ENSMUST00000180690 Ensembl | MGI Sequence Detail 2618 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Phenotypes 6
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-Le-Grand). 1999 Jul;45(5):737-50
  • Latest
    J:255082 Kurogi S, et al., Development of an efficient screening system to identify novel bone metabolism-related genes using the exchangeable gene trap mutagenesis mouse models. Sci Rep. 2017 Jan 20;7:40692

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/12/2021
MGI 6.17
The Jackson Laboratory