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Rps27a Gene Detail
Summary
  • Symbol
    Rps27a
  • Name
    ribosomal protein S27A
  • Synonyms
    0610006J14Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925544
    NCBI Gene: 78294
  • Gene Overview
    MyGene.info: RPS27A
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:29545842-29548040 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 16.79 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    27 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925544
protein coding gene Chr11:29545842-29548109 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018109
protein coding gene Chr11:27561713-27565996 (-)
A/J MGP_AJ_G0018081
protein coding gene Chr11:26539276-26541539 (-)
AKR/J MGP_AKRJ_G0018046
protein coding gene Chr11:27404677-27406940 (-)
BALB/cJ MGP_BALBcJ_G0018049
protein coding gene Chr11:26742826-26745089 (-)
C3H/HeJ MGP_C3HHeJ_G0017863
protein coding gene Chr11:27318814-27321077 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018502
protein coding gene Chr11:28496325-28498955 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016159
protein coding gene Chr11:25178268-25180656 (-)
CAST/EiJ MGP_CASTEiJ_G0017425
protein coding gene Chr11:27374849-27377119 (-)
CBA/J MGP_CBAJ_G0017837
protein coding gene Chr11:29844691-29846954 (-)
DBA/2J MGP_DBA2J_G0017947
protein coding gene Chr11:26398975-26401238 (-)
FVB/NJ MGP_FVBNJ_G0017939
protein coding gene Chr11:26199433-26201696 (-)
LP/J MGP_LPJ_G0018019
protein coding gene Chr11:27810983-27814128 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017965
protein coding gene Chr11:30932689-30934952 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018542
protein coding gene Chr11:27500992-27505000 (-)
PWK/PhJ MGP_PWKPhJ_G0017207
protein coding gene Chr11:26486875-26489374 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017002
protein coding gene Chr11:27198111-27200390 (-)
WSB/EiJ MGP_WSBEiJ_G0017478
protein coding gene Chr11:27209098-27211759 (-)



Homology
more
  • Human Ortholog
    RPS27A, ribosomal protein S27a
  • Vertebrate Orthologs
    12
  • Human Ortholog
    RPS27A, ribosomal protein S27a
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CEP80, HEL112, S27A, UBA80, UBC, UBCEP1, UBCEP80
  • Links
    NCBI Gene ID: 6233
    neXtProt AC: NX_P62979
    UniProt: P62979

  • Chr Location
    2p16.1; chr2:55231903-55235853 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    18
  • Chemically induced (other)
    1
  • Gene trapped
    14
  • Targeted
    3
  • Genomic Mutations
    1 involving Rps27a
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 78294 NCBI Gene Model | MGI Sequence Detail 2199 C57BL/6J ±  kb
transcript NM_001033865 RefSeq | MGI Sequence Detail 821 Not Specified  
polypeptide P62983 UniProt | EBI | MGI Sequence Detail 156 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 7
References
more
  • Summaries
    All 40
    Gene Ontology 7
    Phenotypes 11
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory