About   Help   FAQ
5330439K02Rik Gene Detail
Summary
  • Symbol
    5330439K02Rik
  • Name
    RIKEN cDNA 5330439K02 gene
Location &
Maps
more
  • Sequence Map
    Chr15:100459740-100468691 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 56.31 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    72 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925532
lncRNA gene Chr15:100439244-100468726 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005624
lincRNA gene Chr15:102417284-102431701 (-)
A/J MGP_AJ_G0005611
lincRNA gene Chr15:98384880-98393787 (-)
AKR/J MGP_AKRJ_G0005590
lincRNA gene Chr15:101395382-101405636 (-)
BALB/cJ MGP_BALBcJ_G0005591
lincRNA gene Chr15:98505561-98514258 (-)
C3H/HeJ MGP_C3HHeJ_G0005538
lincRNA gene Chr15:101470184-101479400 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005749
lincRNA gene Chr15:106259865-106271346 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005114
lincRNA gene Chr15:94156713-94165920 (-)
CAST/EiJ MGP_CASTEiJ_G0005482
lincRNA gene Chr15:102477940-102479846 (+)
CBA/J MGP_CBAJ_G0005528
lincRNA gene Chr15:109914137-109923693 (-)
DBA/2J MGP_DBA2J_G0005543
lincRNA gene Chr15:97751536-97762385 (-)
FVB/NJ MGP_FVBNJ_G0005570
lincRNA gene Chr15:96765351-96774292 (-)
LP/J MGP_LPJ_G0005627
lincRNA gene Chr15:102594727-102603423 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005555
lincRNA gene Chr15:113633681-113643896 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005749
lincRNA gene Chr15:101403810-101412535 (-)
PWK/PhJ MGP_PWKPhJ_G0005431
lincRNA gene Chr15:97878947-97888372 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005349
lincRNA gene Chr15:101294964-101303689 (-)
WSB/EiJ MGP_WSBEiJ_G0005532
lincRNA gene Chr15:102030826-102039457 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    16 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 5330439K02Rik
  • Find Mice (IMSR)
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097827 Ensembl Gene Model | MGI Sequence Detail 8952 C57BL/6J ±  kb
transcript ENSMUST00000180953 Ensembl | MGI Sequence Detail 2312 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 24
    Phenotypes 16
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
09/10/2019
MGI 6.14
The Jackson Laboratory