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5330434G04Rik Gene Detail
Summary
  • Symbol
    5330434G04Rik
  • Name
    RIKEN cDNA 5330434G04 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925519
    NCBI Gene: 100043213
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:105372994-105391754 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 46.89 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    79 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925519
lncRNA gene ChrX:105348282-105391776 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007558
lincRNA gene ChrX:102115054-102157058 (-)
A/J MGP_AJ_G0007557
lincRNA gene ChrX:101923447-101971068 (-)
AKR/J MGP_AKRJ_G0007527
lincRNA gene ChrX:105136750-105184321 (-)
BALB/cJ MGP_BALBcJ_G0007531
lincRNA gene ChrX:100754613-100798558 (-)
C3H/HeJ MGP_C3HHeJ_G0007478
lincRNA gene ChrX:102554454-102611562 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007704
lincRNA gene ChrX:105045369-105091764 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006881
lincRNA gene ChrX:99441968-99483258 (-)
CAST/EiJ MGP_CASTEiJ_G0007380
lincRNA gene ChrX:86736814-86781993 (-)
CBA/J MGP_CBAJ_G0007459
lincRNA gene ChrX:108354429-108402797 (-)
DBA/2J MGP_DBA2J_G0007484
lincRNA gene ChrX:101210281-101252839 (-)
FVB/NJ MGP_FVBNJ_G0007500
lincRNA gene ChrX:100508694-100551584 (-)
LP/J MGP_LPJ_G0007564
lincRNA gene ChrX:103075151-103119929 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007479
lincRNA gene ChrX:113020233-113068091 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007707
lincRNA gene ChrX:101773383-101820679 (-)
PWK/PhJ MGP_PWKPhJ_G0007317
lincRNA gene ChrX:84264729-84309656 (-)
SPRET/EiJ MGP_SPRETEiJ_G0007222
lincRNA gene ChrX:87448384-87491976 (-)
WSB/EiJ MGP_WSBEiJ_G0007441
lincRNA gene ChrX:100472215-100519785 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100043213 NCBI Gene Model | MGI Sequence Detail 18761 C57BL/6J ±  kb
transcript NR_015552 RefSeq | MGI Sequence Detail 3449 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
Other
Accession IDs
less
MGI:3782475
References
more
  • Summaries
    All 14
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory