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Lrrc9 Gene Detail
Summary
  • Symbol
    Lrrc9
  • Name
    leucine rich repeat containing 9
  • Synonyms
    4921529O18Rik, 4930432K16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925507
    NCBI Gene: 78257
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:72433942-72517989 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 30.20 cM, cytoband C3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    907 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925507
protein coding gene Chr12:72433942-72530750 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019825
protein coding gene Chr12:72273991-72353776 (+)
A/J MGP_AJ_G0019783
protein coding gene Chr12:69580183-69654022 (+)
AKR/J MGP_AKRJ_G0019759
protein coding gene Chr12:71678930-71751401 (+)
BALB/cJ MGP_BALBcJ_G0019763
protein coding gene Chr12:70066549-70141553 (+)
C3H/HeJ MGP_C3HHeJ_G0019568
protein coding gene Chr12:72122945-72198904 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020215
protein coding gene Chr12:74553541-74627701 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017835
protein coding gene Chr12:67047588-67122058 (+)
CAST/EiJ MGP_CASTEiJ_G0019120
protein coding gene Chr12:66897989-66972473 (+)
CBA/J MGP_CBAJ_G0019538
protein coding gene Chr12:77338289-77420975 (+)
DBA/2J MGP_DBA2J_G0019654
protein coding gene Chr12:69482832-69557552 (+)
FVB/NJ MGP_FVBNJ_G0019641
protein coding gene Chr12:68349505-68424947 (+)
LP/J MGP_LPJ_G0019726
protein coding gene Chr12:72284837-72363489 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019680
protein coding gene Chr12:80507779-80598266 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020250
protein coding gene Chr12:71177460-71253663 (+)
PWK/PhJ MGP_PWKPhJ_G0018885
protein coding gene Chr12:63778890-63855791 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018680
protein coding gene Chr12:65582901-65664529 (+)
WSB/EiJ MGP_WSBEiJ_G0019171
protein coding gene Chr12:71768002-71848458 (+)



Homology
more
  • Human Ortholog
    LRRC9, leucine rich repeat containing 9
  • Vertebrate Orthologs
    8
  • Human Ortholog
    LRRC9, leucine rich repeat containing 9
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 341883
    UniProt: Q6ZRR7

  • Chr Location
    14q23.1; chr14:59919713-60063559 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 78257 NCBI Gene Model | MGI Sequence Detail 84048 C57BL/6J ±  kb
transcript NM_001142728 RefSeq | MGI Sequence Detail 4739 Not Specified  
polypeptide Q8CDN9 UniProt | EBI | MGI Sequence Detail 1456 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 4
Other
Accession IDs
less
MGI:1923048
References
more
  • Summaries
    All 25
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory