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Armcx1
Gene Detail
Symbol

Name
ID
Armcx1
armadillo repeat containing, X-linked 1
MGI:1925498
Synonyms
3010033I09Rik
Feature Type
protein coding gene
Genetic Map
Chromosome X
56.24 cM, cytoband E3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
ChrX:134717963-134721917 bp, + strand
From VEGA annotation of GRCm38

  3955 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:9589  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

HCOP human homology predictions: ARMCX1
Gene Tree: Armcx1

Human
homologs
ARMCX1, armadillo repeat containing, X-linked 1
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 51309
neXtProt AC: NX_Q9P291

Human Synonyms: ALEX1, GASP7

Human Chr (Location): Xq22.1; chrX:101550531-101554700 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(9) : Gene trapped(8) Targeted(1)
Incidental mutations (data from APF )
Interactions
Armcx1 interacts with 103 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component integral component of membrane, membrane
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (63)    Tissues (11)    Images (21)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 59
RT-PCR 4
cDNA source data(10)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(11) cDNA(10) Primer pair(1)
Microarray probesets(2)
Other database
links
VEGA Gene Model OTTMUSG00000019429 (Evidence)
Ensembl Gene Model ENSMUSG00000033460 (Evidence)
Entrez Gene 78248 (Evidence)
DFCI TC1577528, TC1589627
DoTS DT.102557048, DT.523772
NIA Mouse Gene Index U020201
Consensus CDS Project CCDS30398.1
International Mouse Phenotyping Consortium Status Armcx1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000019429 VEGA Gene Model | MGI Sequence Detail 3955 C57BL/6J ±  kb
transcript OTTMUST00000046388 VEGA | MGI Sequence Detail 2413 Not Applicable 
polypeptide OTTMUSP00000020944 VEGA | MGI Sequence Detail 456 Not Applicable 

For the selected sequences
All sequences(72) RefSeq(18) UniProt(1)
Polymorphisms
SNPs within 2kb(42 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000225 Armadillo
InterPro IPR011989 Armadillo-like helical
InterPro IPR006911 Armadillo repeat-containing domain
InterPro IPR016024 Armadillo-type fold
Protein Ontology PR:000032088 armadillo repeat-containing X-linked protein 1
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(29)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory