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Armcx1 Gene Detail
Summary
  • Symbol
    Armcx1
  • Name
    armadillo repeat containing, X-linked 1
  • Synonyms
    3010033I09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925498
    NCBI Gene: 78248
  • Gene Overview
    MyGene.info: ARMCX1
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:134717963-134721917 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 56.24 cM, cytoband E3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    42 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925498
protein coding gene ChrX:134717913-134721917 (.)
129S1/SvImJ MGP_129S1SvImJ_G0036075
protein coding gene ChrX:131906498-131910411 (+)
A/J MGP_AJ_G0036055
protein coding gene ChrX:131333566-131337490 (+)
AKR/J MGP_AKRJ_G0035977
protein coding gene ChrX:135541165-135545078 (+)
BALB/cJ MGP_BALBcJ_G0036048
protein coding gene ChrX:129772210-129776123 (+)
C3H/HeJ MGP_C3HHeJ_G0035751
protein coding gene ChrX:131993512-131997425 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036570
protein coding gene ChrX:135794337-135798291 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033398
protein coding gene ChrX:123505794-123509762 (+)
CAST/EiJ MGP_CASTEiJ_G0035039
protein coding gene ChrX:112860327-112864308 (+)
CBA/J MGP_CBAJ_G0035729
protein coding gene ChrX:139874961-139878874 (+)
DBA/2J MGP_DBA2J_G0035883
protein coding gene ChrX:130638226-130642139 (+)
FVB/NJ MGP_FVBNJ_G0035824
protein coding gene ChrX:129963451-129967405 (+)
LP/J MGP_LPJ_G0035976
protein coding gene ChrX:132793497-132797410 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035853
protein coding gene ChrX:147233278-147237232 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036600
protein coding gene ChrX:131346283-131350237 (+)
PWK/PhJ MGP_PWKPhJ_G0034731
protein coding gene ChrX:109805759-109809849 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034562
protein coding gene ChrX:113510868-113514889 (+)
WSB/EiJ MGP_WSBEiJ_G0035177
protein coding gene ChrX:129717842-129721792 (+)



Homology
more
  • Human Ortholog
    ARMCX1, armadillo repeat containing X-linked 1
  • Vertebrate Orthologs
    6
  • Human Ortholog
    ARMCX1, armadillo repeat containing X-linked 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ALEX1, GASP7
  • Links
    NCBI Gene ID: 51309
    neXtProt AC: NX_Q9P291
    UniProt: Q9P291

  • Chr Location
    Xq22.1; chrX:101550531-101554700 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000033460 Ensembl Gene Model | MGI Sequence Detail 3955 C57BL/6J ±  kb
transcript ENSMUST00000113201 Ensembl | MGI Sequence Detail 2228 Not Applicable  
polypeptide ENSMUSP00000108826 Ensembl | MGI Sequence Detail 456 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 11
    Primer pair 1

    Microarray probesets 2
References
more
  • Summaries
    All 28
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:232932 Holmfeldt P, et al., Functional screen identifies regulators of murine hematopoietic stem cell repopulation. J Exp Med. 2016 Mar 7;213(3):433-49

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory