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Armcx1
Gene Detail
Symbol

Name
ID
Armcx1
armadillo repeat containing, X-linked 1
MGI:1925498
Synonyms
3010033I09Rik
Feature Type
protein coding gene
Genetic Map
Chromosome X
56.24 cM, cytoband E3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
ChrX:134717963-134721917 bp, + strand
From VEGA annotation of GRCm38

  3955 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:9589  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: Armcx1

Human
homologs
Human Homolog ARMCX1, armadillo repeat containing, X-linked 1
NCBI Gene ID 51309
neXtProt AC  NX_Q9P291
Human Synonyms  ALEX1, GASP7
Human Chr (Location)  Xq21.33-q22.2; chrX:101550531-101554700 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(9) : Gene trapped(8) Targeted(1)
Incidental mutations (data from APF )
Interactions
Armcx1 interacts with 103 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component integral component of membrane, membrane
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (63)    Tissues (11)    Images (21)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 59
RT-PCR 4
cDNA source data(10)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(11) cDNA(10) Primer pair(1)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000019429 (Evidence)
Ensembl Gene ModelENSMUSG00000033460 (Evidence)
Entrez Gene78248 (Evidence)
DFCITC1589627, TC1577528
DoTSDT.523772, DT.102557048
NIA Mouse Gene IndexU020201
Consensus CDS ProjectCCDS30398.1
International Mouse Knockout Project StatusArmcx1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000019429 VEGA Gene Model | MGI Sequence Detail 3955 C57BL/6J ±  kb
transcript OTTMUST00000046388 VEGA | MGI Sequence Detail 2413 Not Applicable 
polypeptide OTTMUSP00000020944 VEGA | MGI Sequence Detail 456 Not Applicable 

For the selected sequences
All sequences(74) RefSeq(20) UniProt(1)
Polymorphisms
SNPs within 2kb(42 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000225 Armadillo
InterPro IPR011989 Armadillo-like helical
InterPro IPR006911 Armadillo repeat-containing domain
InterPro IPR016024 Armadillo-type fold
Protein Ontology PR:000032088 armadillo repeat-containing X-linked protein 1
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(30)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory