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Phf23 Gene Detail
Summary
  • Symbol
    Phf23
  • Name
    PHD finger protein 23
  • Synonyms
    2410141M05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925496
    NCBI Gene: 78246
  • Alliance
    genome feature page
  • Transcription Start Sites
    13 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:69886603-69890835 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 42.95 cM, cytoband B4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    18 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925496
 protein coding gene Chr11:69886592-69890837 (+)
129S1/SvImJ ENSMUSG00200049438
 protein coding gene Chr11:66833591-66837823 (+)
A/J ENSMUSG00195040983
 protein coding gene Chr11:66860063-66864295 (+)
AKR/J ENSMUSG00220054083
 protein coding gene Chr11:66969064-66973295 (+)
BALB/cJ ENSMUSG00180036263
 protein coding gene Chr11:66928619-66932851 (+)
C3H/HeJ ENSMUSG00175053830
 protein coding gene Chr11:66878809-66883041 (+)
C57BL/6NJ ENSMUSG00215052085
 protein coding gene Chr11:66655974-66660206 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016612
 protein coding gene Chr11:64744810-64749050 (+)
CAST/EiJ ENSTCUG00005053268
 protein coding gene Chr11:66421562-66425789 (+)
CBA/J ENSMUSG00210054286
 protein coding gene Chr11:66732883-66737115 (+)
DBA/2J ENSMUSG00185041675
 protein coding gene Chr11:66934900-66939130 (+)
FVB/NJ ENSMUSG00205053159
 protein coding gene Chr11:66826610-66830837 (+)
JF1/MsJ ENSUMUG00000051047
 protein coding gene Chr11:67333326-67337556 (+)
LP/J ENSMUSG00230053665
 protein coding gene Chr11:68043928-68048160 (+)
NOD/ShiLtJ ENSMUSG00190053923
 protein coding gene Chr11:66962816-66967047 (+)
NZO/HlLtJ ENSMUSG00225044053
 protein coding gene Chr11:70225372-70229604 (+)
PWK/PhJ ENSLUMG00010053253
 protein coding gene Chr11:66848641-66852872 (+)
SPRET/EiJ ENSMSPG00010045778
 protein coding gene Chr11:67578662-67582879 (+)
WSB/EiJ ENSIUOG00005047650
 protein coding gene Chr11:66864221-66868449 (+)



Homology
more
  • Human Ortholog
    PHF23, PHD finger protein 23
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PHF23, PHD finger protein 23
  • Synonyms
    hJUNE-1b
  • Links
    NCBI Gene ID: 79142
    UniProt: Q9BUL5

  • Chr Location
    17p13.1; chr17:7235029-7240828 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    15 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    18
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    639
  • Tissues
    42
  • cDNA Data
    97
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000018572 Ensembl Gene Model | MGI Sequence Detail 4233 C57BL/6J ±  kb
transcript ENSMUST00000018716 Ensembl | MGI Sequence Detail 2006 Not Applicable  
polypeptide ENSMUSP00000018716 Ensembl | MGI Sequence Detail 401 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 98
    cDNA 97
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 47
    Developmental Gene Expression 4
    Gene Ontology 5
    Phenotypes 15
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:301335 Chen M, et al., An Epigenetic Mechanism Underlying Chromosome 17p Deletion-Driven Tumorigenesis. Cancer Discov. 2020 Sep 25;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory