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Cst11 Gene Detail
Summary
  • Symbol
    Cst11
  • Name
    cystatin 11
  • Synonyms
    9230101F08Rik, CRES2, cystatin E1, mCST E1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925490
    NCBI Gene: 78240
  • Gene Overview
    MyGene.info: CST11
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:148768618-148771497 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 73.54 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    106 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925490
protein coding gene Chr2:148768609-148771497 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026613
protein coding gene Chr2:153116465-153119344 (-)
A/J MGP_AJ_G0026577
protein coding gene Chr2:146884069-146887038 (-)
AKR/J MGP_AKRJ_G0026551
protein coding gene Chr2:151133345-151136233 (-)
BALB/cJ MGP_BALBcJ_G0026589
protein coding gene Chr2:147313657-147316610 (-)
C3H/HeJ MGP_C3HHeJ_G0026332
protein coding gene Chr2:151624980-151627991 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027034
protein coding gene Chr2:157575891-157578776 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024412
protein coding gene Chr2:140888453-140891328 (-)
CAST/EiJ MGP_CASTEiJ_G0025793
protein coding gene Chr2:152020948-152023866 (-)
CBA/J MGP_CBAJ_G0026312
protein coding gene Chr2:163351858-163356995 (-)
DBA/2J MGP_DBA2J_G0026446
protein coding gene Chr2:146151182-146154143 (-)
FVB/NJ MGP_FVBNJ_G0026410
protein coding gene Chr2:144647714-144651498 (-)
LP/J MGP_LPJ_G0026550
protein coding gene Chr2:153255071-153257954 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026430
protein coding gene Chr2:167396836-167399751 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027089
protein coding gene Chr2:151133793-151137310 (-)
PWK/PhJ MGP_PWKPhJ_G0025529
protein coding gene Chr2:145829488-145832415 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025330
protein coding gene Chr2:150100652-150103513 (-)
WSB/EiJ MGP_WSBEiJ_G0025867
protein coding gene Chr2:152081276-152084172 (-)



Homology
more
  • Human Ortholog
    CST11, cystatin 11
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CST11, cystatin 11
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CST8L, CTES2, dJ322G13.6, SC13
  • Links
    NCBI Gene ID: 140880
    neXtProt AC: NX_Q9H112
    UniProt: Q9H112

  • Chr Location
    20p11.21; chr20:23450404-23452845 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 78240 NCBI Gene Model | MGI Sequence Detail 2880 C57BL/6J ±  kb
transcript NM_030059 RefSeq | MGI Sequence Detail 606 C57BL/6  
polypeptide Q9D269 UniProt | EBI | MGI Sequence Detail 139 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    cDNA 4
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:2139425
References
more
  • Summaries
    All 30
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 4
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory