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4930539E08Rik Gene Detail
Summary
  • Symbol
    4930539E08Rik
  • Name
    RIKEN cDNA 4930539E08 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925441
    NCBI Gene: 207819
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:28896392-28915324 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 15.03 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    140 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925441
 protein coding gene Chr17:28895274-28915336 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023452
 protein coding gene Chr17:28368162-28388174 (-)
A/J MGP_AJ_G0023410
 protein coding gene Chr17:27403405-27423792 (-)
AKR/J MGP_AKRJ_G0023375
 protein coding gene Chr17:27623464-27644923 (-)
BALB/cJ MGP_BALBcJ_G0023415
 protein coding gene Chr17:27689196-27709449 (-)
C3H/HeJ MGP_C3HHeJ_G0023176
 protein coding gene Chr17:28014807-28034229 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023857
 protein coding gene Chr17:29500179-29522684 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021332
 protein coding gene Chr17:24754742-24774568 (-)
CAST/EiJ MGP_CASTEiJ_G0022677
 protein coding gene Chr17:27994721-28019015 (-)
CBA/J MGP_CBAJ_G0023150
 protein coding gene Chr17:30584641-30608371 (-)
DBA/2J MGP_DBA2J_G0023281
 protein coding gene Chr17:26951000-26969859 (-)
FVB/NJ MGP_FVBNJ_G0023251
 protein coding gene Chr17:26778560-26798567 (-)
LP/J MGP_LPJ_G0023359
 protein coding gene Chr17:28626316-28645279 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023269
 protein coding gene Chr17:29970084-29989653 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023899
 protein coding gene Chr17:28075365-28097983 (-)
PWK/PhJ MGP_PWKPhJ_G0022427
 protein coding gene Chr17:25778290-25799824 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022245
 protein coding gene Chr17:26081716-26101312 (-)
WSB/EiJ MGP_WSBEiJ_G0022739
 protein coding gene Chr17:28048792-28072394 (-)



Homology
more
  • Human Ortholog
    C6orf222, chromosome 6 open reading frame 222
  • Vertebrate Orthologs
    7
  • Human Ortholog
    C6orf222, chromosome 6 open reading frame 222
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 389384
    neXtProt AC: NX_P0C671
    UniProt: P0C671

  • Chr Location
    6p21.31; chr6:36315757-36337015 (-)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    83
  • Tissues
    18
  • cDNA Data
    4
  • Literature Summary
    2
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000048905 Ensembl Gene Model | MGI Sequence Detail 18933 C57BL/6J ±  kb
transcript ENSMUST00000062357 Ensembl | MGI Sequence Detail 4597 Not Applicable  
polypeptide ENSMUSP00000050646 Ensembl | MGI Sequence Detail 669 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR031362 Uncharacterised protein C6orf222
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 3
References
more
  • Summaries
    All 19
    Developmental Gene Expression 2
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:228563 Koscielny G, et al., The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. Nucleic Acids Res. 2014 Jan;42(Database issue):D802-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
03/13/2019
MGI 6.13 		The Jackson Laboratory