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Gsdmcl2 Pseudogene Detail
Summary
  • Symbol
    Gsdmcl2
  • Name
    gasdermin C-like 2
  • Synonyms
    4921501E01Rik, 4930453O09Rik, Gm7779
  • Feature Type
    pseudogene
  • IDs
    MGI:1925409
    NCBI Gene: 665769
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr15:63880707-63889073 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 28.04 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    4 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925409
pseudogene Chr15:63880707-63890512 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0039799
pseudogene Chr15:60775775-60868405 (+)
AKR/J MGP_AKRJ_G0039725
pseudogene Chr15:62478382-62587071 (+)
BALB/cJ MGP_BALBcJ_G0039771
pseudogene Chr15:60997336-61089172 (+)
C3H/HeJ MGP_C3HHeJ_G0039427
pseudogene Chr15:62619879-62671733 (+)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0038542
pseudogene Chr15:63426124-63427945 (+)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0039632
pseudogene Chr15:63119170-63218510 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0040438
pseudogene Chr15:62903007-63032876 (+)
PWK/PhJ MGP_PWKPhJ_G0038221
pseudogene Chr15:60748452-60750325 (+)
SPRET/EiJ MGP_SPRETEiJ_G0037963
pseudogene Chr15:62819786-62848532 (+)
WSB/EiJ MGP_WSBEiJ_G0038775
pseudogene Chr15:62964952-62966911 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    23 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    3
  • Radiation induced
    2
  • Genomic Mutations
    5 involving Gsdmcl2
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 665769 NCBI Gene Model | MGI Sequence Detail 8367 C57BL/6J ±  kb
transcript NR_108053 RefSeq | MGI Sequence Detail 1044 Not Specified  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 4
Other
Accession IDs
less
MGI:1918070, MGI:3779763
References
more
  • Summaries
    All 36
    Diseases 1
    Phenotypes 23
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/19/2021
MGI 6.16
The Jackson Laboratory