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Cyp20a1
Gene Detail
Symbol

Name
ID
Cyp20a1
cytochrome P450, family 20, subfamily a, polypeptide 1
MGI:1925201
Synonyms
A930011N14Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 1
30.47 cM, cytoband C2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:60343323-60388060 bp, + strand
From VEGA annotation of GRCm38

  44738 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:18584  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: CYP20A1
Gene Tree: Cyp20a1

Human
homologs
CYP20A1, cytochrome P450, family 20, subfamily A, polypeptide 1
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 57404
neXtProt AC: NX_Q6UW02

Human Synonyms: CYP-M

Human Chr (Location): 2q33.2; chr2:203238441-203305840 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(8) : Gene trapped(6) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Cyp20a1 interacts with 207 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (2 records)
Data Summary: Results (53)    Tissues (16)    Images (19)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 41
RT-PCR 12
cDNA source data(26)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase cyp20a1 ; ZFIN cyp20a1    NEW 
Molecular
reagents
All nucleic(27) cDNA(26) Primer pair(1)
Microarray probesets(5)
Other database
links
VEGA Gene Model OTTMUSG00000021516 (Evidence)
Ensembl Gene Model ENSMUSG00000049439 (Evidence)
Entrez Gene 77951 (Evidence)
UniGene 197640
DFCI TC1595398, TC1583606
DoTS DT.91333058, DT.60101962, DT.101186836
NIA Mouse Gene Index U000341
EC 1.14.-.-
Consensus CDS Project CCDS14990.1
International Mouse Phenotyping Consortium Status Cyp20a1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000021516 VEGA Gene Model | MGI Sequence Detail 44738 C57BL/6J ±  kb
transcript OTTMUST00000051028 VEGA | MGI Sequence Detail 2223 Not Applicable 
polypeptide OTTMUSP00000023955 VEGA | MGI Sequence Detail 462 Not Applicable 

For the selected sequences
All sequences(34) RefSeq(6) UniProt(3)
Polymorphisms
SNPs within 2kb(300 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001128 Cytochrome P450
InterPro IPR002401 Cytochrome P450, E-class, group I
Protein Ontology PR:000006104 cytochrome P450 20A1
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(36)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory