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Pate13 Gene Detail
Summary
  • Symbol
    Pate13
  • Name
    prostate and testis expressed 13
  • Synonyms
    9230113P08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925158
    NCBI Gene: 77908
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:35908423-35910796 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 20.52 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    65 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925158
protein coding gene Chr9:35908316-35911233 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034547
protein coding gene Chr9:33725926-33730588 (+)
A/J MGP_AJ_G0034526
protein coding gene Chr9:32867209-33029454 (+)
AKR/J MGP_AKRJ_G0034453
protein coding gene Chr9:34007967-34009057 (-)
BALB/cJ MGP_BALBcJ_G0034516
protein coding gene Chr9:32784256-32786970 (+)
C3H/HeJ MGP_C3HHeJ_G0034230
protein coding gene Chr9:34032902-34145404 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035039
protein coding gene Chr9:35262079-35269942 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0033551
protein coding gene Chr9:33874404-33875646 (+)
CBA/J MGP_CBAJ_G0034203
protein coding gene Chr9:36448569-36474040 (-)
DBA/2J MGP_DBA2J_G0034361
protein coding gene Chr9:33317979-33324125 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0034445
protein coding gene Chr9:33988917-33991847 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0035057
protein coding gene Chr9:33572354-33573553 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000078934 Ensembl Gene Model | MGI Sequence Detail 2374 C57BL/6J ±  kb
transcript ENSMUST00000176153 Ensembl | MGI Sequence Detail 414 Not Applicable  
polypeptide ENSMUSP00000135716 Ensembl | MGI Sequence Detail 137 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4
References
more
  • Summaries
    All 15
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:270449 Loughner CL, et al., Organization, evolution and functions of the human and mouse Ly6/uPAR family genes. Hum Genomics. 2016 Apr 21;10:10

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/21/2020
MGI 6.14
The Jackson Laboratory