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Pate13 Gene Detail
Summary
  • Symbol
    Pate13
  • Name
    prostate and testis expressed 13
  • Synonyms
    9230113P08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925158
    NCBI Gene: 77908
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:35908423-35910796 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 20.52 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    65 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925158
protein coding gene Chr9:35908423-35910796 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034547
protein coding gene Chr9:33725926-33730588 (+)
A/J MGP_AJ_G0034526
protein coding gene Chr9:32867209-33029454 (+)
AKR/J MGP_AKRJ_G0034453
protein coding gene Chr9:34007967-34009057 (-)
BALB/cJ MGP_BALBcJ_G0034516
protein coding gene Chr9:32784256-32786970 (+)
C3H/HeJ MGP_C3HHeJ_G0034230
protein coding gene Chr9:34032902-34145404 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035039
protein coding gene Chr9:35262079-35269942 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0033551
protein coding gene Chr9:33874404-33875646 (+)
CBA/J MGP_CBAJ_G0034203
protein coding gene Chr9:36448569-36474040 (-)
DBA/2J MGP_DBA2J_G0034361
protein coding gene Chr9:33317979-33324125 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0034445
protein coding gene Chr9:33988917-33991847 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0035057
protein coding gene Chr9:33572354-33573553 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 77908 NCBI Gene Model | MGI Sequence Detail 2374 C57BL/6J ±  kb
transcript NM_001378222 RefSeq | MGI Sequence Detail 1694 C57BL/6  
polypeptide NP_001365151 RefSeq | MGI Sequence Detail 137 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4
References
more
  • Summaries
    All 15
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:270449 Loughner CL, et al., Organization, evolution and functions of the human and mouse Ly6/uPAR family genes. Hum Genomics. 2016 Apr 21;10:10

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/10/2020
MGI 6.16
The Jackson Laboratory